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13_1_40cm_2_scaffold_27800

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_27800_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3..884
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R716_PELHB
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_2_scaffold_27800_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(894..1667)
DNA (774bp) protein (258aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_27800_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1765..2145)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039E7CDC
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_27800_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2215..2709)
DNA (495bp) protein (165aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
13_1_40cm_2_scaffold_27800_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2725..3138)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WAQ4_9SPHN
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_2_scaffold_27800_6
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3297..4880)
DNA (1584bp) protein (528aa)
Putative membrane protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F493_ACIC5 rbh
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
13_1_40cm_2_scaffold_27800_7
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4852..5877)
DNA (1026bp) protein (342aa)
Glycosyl transferase family 2 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQ64_CLOC7
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADL50131.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (st
13_1_40cm_2_scaffold_27800_8
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

5978..6805
DNA (828bp) protein (276aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03769 peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] Tax=RBG_16_RIF03_38_10_curated
SurA N-terminal domain protein n=1 Tax=Clostridium difficile CD175 RepID=T3F237_CLODI
foldase lipoprotein
13_1_40cm_2_scaffold_27800_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(6830..7222)
DNA (393bp) protein (131aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein id=14626617 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_27800_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7247..9136)
DNA (1890bp) protein (630aa)
thiamine pyrophosphate binding domain-containing protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HIA7_9BRAD
thiamine pyrophosphate binding domain-containing protein
13_1_40cm_2_scaffold_27800_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9249..9692
DNA (444bp) protein (148aa)
Rhodanese domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZK7_HALO1
rhodanese Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
rhodanese
13_1_40cm_2_scaffold_27800_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9806..10450)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002DCACCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00445.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (
13_1_40cm_2_scaffold_27800_13
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11101..12648)
DNA (1548bp) protein (516aa)
amidase n=1 Tax=Nevskia ramosa RepID=UPI0003B51CBC
Uncharacterized protein {ECO:0000313|EMBL:EIT68479.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
amidase
Displaying 13 items

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