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13_1_40cm_2_scaffold_2889

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2889_trna_1
unknown

Not on your lists

comp(977..1049)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_2889_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(1245..2294)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_2_scaffold_2889_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(2408..4099)
DNA (1692bp) protein (564aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISJ4_KORVE
N-acetylmuramoyl-L-alanine amidase
13_1_40cm_2_scaffold_2889_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4099..4905)
DNA (807bp) protein (269aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037C048B
lytic transglycosylase catalytic subunit subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
lytic transglycosylase catalytic subunit
13_1_40cm_2_scaffold_2889_4
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


comp(4925..7564)
DNA (2640bp) protein (880aa)
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=SYA_SOLUE rbh
13_1_40cm_2_scaffold_2889_5
unknown

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comp(7554..7994)
DNA (441bp) protein (147aa)

This feature has no annotations

13_1_40cm_2_scaffold_2889_6
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8350..8625
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V5H7_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV81511.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanens
13_1_40cm_2_scaffold_2889_7
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8622..9608
DNA (987bp) protein (329aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ABK17769.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABK17769.1};; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Sy
DNA polymerase III, delta subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK17_SYNFM
DNA polymerase III subunit delta
13_1_40cm_2_scaffold_2889_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists


comp(9589..9855)
DNA (267bp) protein (89aa)
30S ribosomal protein S20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS20_KORVE
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_2_scaffold_2889_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

9951..10949
DNA (999bp) protein (333aa)
PhoH family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P10_SOLUE
PhoH-like protein; K06217 phosphate starvation-inducible protein PhoH and related proteins Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PhoH family protein
13_1_40cm_2_scaffold_2889_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10933..11358
DNA (426bp) protein (142aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" sourc
Endoribonuclease YbeY n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW5_9BACT
rRNA maturation factor
13_1_40cm_2_scaffold_2889_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

11352..12620
DNA (1269bp) protein (423aa)
CBS domain containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW6_9BACT
CBS domain-containing protein {ECO:0000313|EMBL:CDM65290.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_2_scaffold_2889_12
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

12812..13783
DNA (972bp) protein (324aa)
GTPase Era n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW7_9BACT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
era; GTPase
13_1_40cm_2_scaffold_2889_13
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13785..14321)
DNA (537bp) protein (179aa)
Type II secretion system protein G n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WYQ9_ACISM
type II secretion system protein G
Type II secretion system protein G {ECO:0000313|EMBL:ADW68745.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (
13_1_40cm_2_scaffold_2889_14
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14296..14862)
DNA (567bp) protein (189aa)
General secretion pathway protein G n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ51_KORVE
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
general secretion pathway protein G
13_1_40cm_2_scaffold_2889_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(14859..17156)
DNA (2298bp) protein (766aa)
Type II and III secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQ52_KORVE
type II and III secretion system protein; K02453 general secretion pathway protein D Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
type II and III secretion system protein
13_1_40cm_2_scaffold_2889_16
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

17171..18523
DNA (1353bp) protein (451aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJ74_ANASK
13_1_40cm_2_scaffold_2889_17
Triticum aestivum, Triticum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

18686..19465
DNA (780bp) protein (260aa)
Putative omega secalin {ECO:0000313|EMBL:ACO40285.1}; TaxID=4565 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae;
13_1_40cm_2_scaffold_2889_18
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

19462..19908
DNA (447bp) protein (149aa)
SsrA-binding protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV7_9BACT
smpB; ssrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
smpB; ssrA RNA (tmRNA)-binding protein
13_1_40cm_2_scaffold_2889_19
Xenopus (Silurana) tropicalis, Xenopus, Anura, Amphibia, Chordata, Metazoa

Not on your lists

19984..20607
DNA (624bp) protein (208aa)
ficd, hype, unq3041; FIC domain containing (EC:2.7.7.n1)
Adenosine monophosphate-protein transferase FICD n=2 Tax=Xenopus tropicalis RepID=FICD_XENTR
Adenosine monophosphate-protein transferase FICD {ECO:0000313|Ensembl:ENSXETP00000038311}; Flags: Fragment;; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphi
13_1_40cm_2_scaffold_2889_20
R_Omnitrophica_45_10b, Omnitrophica, Bacteria

Not on your lists

20594..21619
DNA (1026bp) protein (342aa)
thiamine biosynthesis protein ThiF n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6FCFE
dinucleotide-utilizing protein
Tax=RIFCSPLOWO2_01_FULL_Omnitrophica_45_10b_curated
13_1_40cm_2_scaffold_2889_21
unknown

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comp(21659..22009)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_2_scaffold_2889_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(22178..22816)
DNA (639bp) protein (213aa)
Methyltransferase type 11 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SM4_SOLUE
type 11 methyltransferase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type 11 methyltransferase
13_1_40cm_2_scaffold_2889_23
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23000..23668
DNA (669bp) protein (223aa)
[lipopolysaccharide]-lipid A 3-O-deacylase outer membrane protein, PagL family n=2 Tax=Geobacter metallireducens RepID=Q39UY9_GEOMG
[lipopolysaccharide]-lipid A 3-O-deacylase outer membrane protein
[lipopolysaccharide]-lipid A 3-O-deacylase outer membrane protein, PagL family {ECO:0000313|EMBL:ABB31935.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; G
13_1_40cm_2_scaffold_2889_24
unknown

Not on your lists

23721..24029
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_2889_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(24046..26613)
DNA (2568bp) protein (856aa)
Heavy metal efflux pump, CzcA family, putative Acriflavine resistance protein B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE74_9BACT
Heavy metal efflux pump, cobalt-zinc-cadmium {ECO:0000313|EMBL:CDM64849.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphat
CzcA family heavy metal efflux pump
Displaying 26 items

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