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13_1_40cm_2_scaffold_2848

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2848_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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2..1336
DNA (1335bp) protein (445aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Apolipoprotein N-acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IP58_KORVE
apolipoprotein N-acyltransferase
13_1_40cm_2_scaffold_2848_2
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1531..2409
DNA (879bp) protein (293aa)
Peptide chain release factor 2 n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F428_ACIC5
prfB; peptide chain release factor 2, programmed frameshift
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=240015 species="Bacteria; Acidobacteria; Acidobact
13_1_40cm_2_scaffold_2848_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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2418..4493
DNA (2076bp) protein (692aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ABF43522.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABF43522.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus
ATP-dependent DNA helicase RecG n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHX8_KORVE
ATP-dependent DNA helicase RecG
13_1_40cm_2_scaffold_2848_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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4891..6006
DNA (1116bp) protein (372aa)
S-layer homology domain protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R7J4_THETN
S-layer protein
S-layer homology domain protein {ECO:0000313|EMBL:AAM25549.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
13_1_40cm_2_scaffold_2848_5
Vibrio sp. S234-5, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6045..7121)
DNA (1077bp) protein (359aa)
Predicted permease n=1 Tax=Vibrio vulnificus (strain YJ016) RepID=Q7MHY7_VIBVY
Permease {ECO:0000313|EMBL:KJR28053.1}; TaxID=1616781 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. S234-5.;"
permease
13_1_40cm_2_scaffold_2848_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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7284..7889
DNA (606bp) protein (202aa)
Putative methyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3W6_ACIC5
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:ACO32519.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strai
13_1_40cm_2_scaffold_2848_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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7886..8374
DNA (489bp) protein (163aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
coaD; pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F678_ACIC5
13_1_40cm_2_scaffold_2848_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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8378..9553
DNA (1176bp) protein (392aa)
L-aspartate aminotransferase (EC:2.6.1.1)
L-aspartate aminotransferase {ECO:0000313|EMBL:ABJ88185.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ABJ88185.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Can
L-aspartate aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q85_SOLUE
13_1_40cm_2_scaffold_2848_9
R_OP3X_63_14, OP3X, Bacteria

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comp(9537..10517)
DNA (981bp) protein (327aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
A/G-specific adenine glycosylase (EC:3.2.2.-)
DNA glycosylase n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002E89E50
13_1_40cm_2_scaffold_2848_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10489..11622)
DNA (1134bp) protein (378aa)
Putative Fe-S oxidoreductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHV9_CHLTF
Predicted Fe-S oxidoreductase {ECO:0000313|EMBL:CDM65662.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative Fe-S oxidoreductase
13_1_40cm_2_scaffold_2848_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(11651..12625)
DNA (975bp) protein (325aa)
von Willebrand factor, type A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01T75_SOLUE
von Willebrand factor A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
von Willebrand factor, type A
13_1_40cm_2_scaffold_2848_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(12636..13625)
DNA (990bp) protein (330aa)
von Willebrand factor, type A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP3_KORVE
von Willebrand factor, type A Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
von Willebrand factor A
13_1_40cm_2_scaffold_2848_13
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13828..14556
DNA (729bp) protein (243aa)
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] Tax=GWD2_Desulfuromonadales_61_12_curated
kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase id=4733810 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_2848_14
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

14532..16163
DNA (1632bp) protein (544aa)
pyrG; CTP synthetase; K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=PYRG_ACIC5
13_1_40cm_2_scaffold_2848_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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16160..16978
DNA (819bp) protein (273aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase; KDO-8-phosphate synthetase, KDOPS) (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ01_9BACT
13_1_40cm_2_scaffold_2848_16
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16995..17420)
DNA (426bp) protein (142aa)
Peroxiredoxin, OsmC subfamily n=1 Tax=Methylomicrobium album BG8 RepID=H8GG52_METAL
Peroxiredoxin, OsmC subfamily {ECO:0000313|EMBL:EIC29976.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylo
OsmC family protein
13_1_40cm_2_scaffold_2848_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17476..19293
DNA (1818bp) protein (606aa)
peptidyl-dipeptidase A (EC:3.4.15.1); K01283 peptidyl-dipeptidase A [EC:3.4.15.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptidyl-dipeptidase A (EC:3.4.15.1)
Peptidyl-dipeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X12_SOLUE rbh
13_1_40cm_2_scaffold_2848_18
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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19295..20395
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULN8_ANASK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72896.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_2848_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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20392..21390
DNA (999bp) protein (333aa)
Glycosyl transferase group 1 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4ULN7_ANASK
group 1 glycosyl transferase Tax=RBG_16_Acidobacteria_70_10_curated
group 1 glycosyl transferase
13_1_40cm_2_scaffold_2848_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21317..21772)
DNA (456bp) protein (152aa)
Endoribonuclease L-PSP n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYK7_9BURK
endoribonuclease L-PSP Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
endoribonuclease L-PSP
13_1_40cm_2_scaffold_2848_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21998..22723
DNA (726bp) protein (242aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029F6_SOLUE
glyoxalase/bleomycin resistance protein/dioxygenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_2_scaffold_2848_22
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

23041..24423
DNA (1383bp) protein (461aa)
Peptidase M48, Ste24p n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LH24_SYNFM
peptidase M48, Ste24p Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M48, Ste24p
13_1_40cm_2_scaffold_2848_23
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24430..24999
DNA (570bp) protein (190aa)
Conserved hypothetical membrane protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPV5_KORVE
hypothetical protein
Conserved hypothetical membrane protein {ECO:0000313|EMBL:ABF41095.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter v
13_1_40cm_2_scaffold_2848_24
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25017..25622)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U438_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ERK89658.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
Displaying 24 items

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