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13_1_40cm_2_scaffold_2956

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2956_1
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..562)
DNA (561bp) protein (187aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255
Orotidine 5'-phosphate decarboxylase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=PYRF_PELPD
orotidine 5'-phosphate decarboxylase
13_1_40cm_2_scaffold_2956_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(559..1476)
DNA (918bp) protein (306aa)
dihydroorotate dehydrogenase protein (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWC2_Nitrospirae_57_13_curated
Dihydroorotate dehydrogenase id=4510923 bin=GWC2_Nitrospirae_57_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
pyrD; dihydroorotate dehydrogenase, catalytic subunit
13_1_40cm_2_scaffold_2956_3
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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1511..2053
DNA (543bp) protein (181aa)
Bifunctional protein PyrR n=1 Tax=Thermincola potens (strain JR) RepID=D5X7W3_THEPJ
phosphoribosyltransferase
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR
13_1_40cm_2_scaffold_2956_4
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2150..3082
DNA (933bp) protein (311aa)
pyrB; aspartate carbamoyltransferase; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] Tax=GWB2_Deltaproteobacteria_55_19_curated
Aspartate carbamoyltransferase id=2009320 bin=GWB2_Proteobacteria_55_19 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
pyrB; aspartate carbamyltransferase
13_1_40cm_2_scaffold_2956_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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3082..4347
DNA (1266bp) protein (422aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=454194 species="B
dihydroorotase (EC:3.5.2.3)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003772307
13_1_40cm_2_scaffold_2956_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4325..5608
DNA (1284bp) protein (428aa)
Peptidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RGY7_PHEZH rbh
peptidase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptidase
13_1_40cm_2_scaffold_2956_7

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comp(5670..8105)
DNA (2436bp) protein (812aa)
Leucine--tRNA ligase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6N9Y3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN23449.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LeuS; leucyl-tRNA synthetase
13_1_40cm_2_scaffold_2956_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8168..8464
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2V6_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93652.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
13_1_40cm_2_scaffold_2956_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(8489..8935)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEQ9_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_2956_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(8932..9795)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=uncultured Oceanospirillales bacterium HF4000_21D01 RepID=E7C8B7_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_2_scaffold_2956_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(9879..11930)
DNA (2052bp) protein (684aa)
Endothelin-converting enzyme {ECO:0000313|EMBL:ABF40493.1}; EC=3.4.24.71 {ECO:0000313|EMBL:ABF40493.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacter
Endothelin-converting enzyme n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRK7_KORVE
PgPepO oligopeptidase
13_1_40cm_2_scaffold_2956_12
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(12215..12622)
DNA (408bp) protein (136aa)
Ribonuclease H n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2S1_THEOJ
ribonuclease H
Ribonuclease H {ECO:0000313|EMBL:ADL07698.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;"
13_1_40cm_2_scaffold_2956_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12623..13354)
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AV0_SOLUE
hypothetical protein; K07164 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_2956_trna_1
unknown

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comp(13366..13439)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_2956_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13521..15314)
DNA (1794bp) protein (598aa)
RNA polymerase sigma factor SigA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIK4_KORVE
sigma 38, RpoS; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
sigma 38, RpoS
13_1_40cm_2_scaffold_2956_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15357..17090)
DNA (1734bp) protein (578aa)
DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
DNA primase catalytic subunit (EC:2.7.7.-)
DNA primase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHR3_CHLTF
13_1_40cm_2_scaffold_2956_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17165..19525)
DNA (2361bp) protein (787aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=234267 species="Bacteria; Acido
Endonuclease MutS2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P03_SOLUE
Smr protein/MutS2
13_1_40cm_2_scaffold_2956_17
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(19532..20278)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS01_KORVE
hypothetical protein; K06898 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_2_scaffold_2956_18
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(20367..21827)
DNA (1461bp) protein (487aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS00_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF40350.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
13_1_40cm_2_scaffold_2956_19
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

21902..22726
DNA (825bp) protein (275aa)
4-hydroxybenzoate polyprenyltransferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
4-hydroxybenzoate polyprenyltransferase and related prenyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2A3_PELTS
prenyltransferase
13_1_40cm_2_scaffold_2956_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

22744..24297
DNA (1554bp) protein (518aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003735312
ydaM; group 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
glycosyl transferase
13_1_40cm_2_scaffold_2956_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

24279..25445
DNA (1167bp) protein (389aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Aminopeptidase P n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILM5_KORVE
aminopeptidase P
13_1_40cm_2_scaffold_2956_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(25449..26300)
DNA (852bp) protein (284aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_2956_23
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(26297..27499)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VJ1_SOLUE
peroxiredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
thiol-disulfide isomerase
Displaying 24 items

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