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13_1_40cm_2_scaffold_3589

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3589_1
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

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comp(3..158)
DNA (156bp) protein (52aa)
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Planctomycetes_59_8_curated
13_1_40cm_2_scaffold_3589_2
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(306..1973)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036178CC rbh
Repeat regulatory protein {ECO:0000313|EMBL:EMB18548.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula
hypothetical protein
13_1_40cm_2_scaffold_3589_3
unknown

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3424..3666
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_3589_4
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(3553..3852)
DNA (300bp) protein (100aa)
rbpA; RNA-binding protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
Putative RNA-binding protein id=2817745 bin=GWA1_Deltaproteobacteria_52_35 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RNP-1 like RNA-binding protein
13_1_40cm_2_scaffold_3589_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4245..6956)
DNA (2712bp) protein (904aa)
Heat shock protein 70 family protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU3_9BACT
Heat shock protein 70 family protein {ECO:0000313|EMBL:EEF63128.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;"
heat shock protein 70 family protein
13_1_40cm_2_scaffold_3589_6
Oikopleura dioica, Oikopleura, Appendicularia, Chordata, Metazoa

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comp(6946..8715)
DNA (1770bp) protein (590aa)
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_242 n=1 Tax=Oikopleura dioica RepID=E4XWU5_OIKDI rbh
Whole genome shotgun assembly, reference scaffold set, scaffold scaffold_242 {ECO:0000313|EMBL:CBY14139.1}; TaxID=34765 species="Eukaryota; Metazoa; Chordata; Tunicata; Appendicularia; Oikopleuridae;
heat shock protein 70 family protein
13_1_40cm_2_scaffold_3589_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8712..9269)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAU1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63126.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_40cm_2_scaffold_3589_8
unknown

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9646..10194
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_2_scaffold_3589_9
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10419..11513)
DNA (1095bp) protein (365aa)
Large glycoprotein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08R52_STIAD
yfaS1; A-macroglobulin complement component Tax=RifOxyA12_full_Proteobacteria_58_15_curated
glycoprotein
13_1_40cm_2_scaffold_3589_10
unknown

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11700..12266
DNA (567bp) protein (189aa)

This feature has no annotations

Displaying 10 items

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