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13_1_40cm_2_scaffold_420

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_420_trna_1
unknown

Not on your lists

209..281
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_420_1
unknown

Not on your lists

comp(294..776)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

799..1218
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0002FF82DF
hypothetical protein
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
13_1_40cm_2_scaffold_420_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

1333..2382
DNA (1050bp) protein (350aa)
pyruvate dehydrogenase (EC:1.2.4.1)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:ABJ81364.1}; EC=1.2.4.1 {ECO:0000313|EMBL:ABJ81364.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Soli
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C52_SOLUE rbh
13_1_40cm_2_scaffold_420_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2446..3420
DNA (975bp) protein (325aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:ABJ81365.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABJ81365.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibac
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C51_SOLUE
13_1_40cm_2_scaffold_420_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3467..4759
DNA (1293bp) protein (431aa)
2-oxoglutarate dehydrogenase E2 component; K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000368E426
2-oxoglutarate dehydrogenase E2
13_1_40cm_2_scaffold_420_6
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4795..5715
DNA (921bp) protein (307aa)
Serine O-acetyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MCS4_9EURY
Serine O-acetyltransferase
Serine O-acetyltransferase {ECO:0000313|EMBL:AFV23948.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus ps
13_1_40cm_2_scaffold_420_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(5720..7561)
DNA (1842bp) protein (614aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIU5_9BACT
phosphomethylpyrimidine synthase
13_1_40cm_2_scaffold_420_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(7658..7987)
DNA (330bp) protein (110aa)
HesB/YadR/YfhF n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRB7_KORVE
HesB/YadR/YfhF Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
HesB/YadR/YfhF
13_1_40cm_2_scaffold_420_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8010..8510)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFY2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_420_10
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

8684..9130
DNA (447bp) protein (149aa)
Putative metal-sulfur cluster biosynthetic enzyme n=1 Tax=Opitutaceae bacterium TAV1 RepID=U5FCF7_9BACT
hypothetical protein Tax=RBG_16_Zixibacteria_48_11_curated
FeS assembly SUF system protein SufT
13_1_40cm_2_scaffold_420_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9184..11304)
DNA (2121bp) protein (707aa)
Putative Fe-S oxidoreductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ16_CHLTF
putative Fe-S oxidoreductase Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
putative Fe-S oxidoreductase
13_1_40cm_2_scaffold_420_12

Not on your lists

comp(11450..11818)
DNA (369bp) protein (123aa)
dihydroneopterin aldolase (EC:4.1.2.25)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000363B341
Dihydroneopterin aldolase {ECO:0000313|EMBL:EQD76692.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_40cm_2_scaffold_420_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11815..12210)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE05
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40736.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_2_scaffold_420_14
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(12380..13297)
DNA (918bp) protein (306aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" s
Thioredoxin reductase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIZ7_CHLTF
13_1_40cm_2_scaffold_420_15
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

13343..14443
DNA (1101bp) protein (367aa)
putative aminotransferase (EC:2.6.1.-) Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
putative aminotransferase (EC:2.6.1.-)
hypothetical protein id=8267406 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
13_1_40cm_2_scaffold_420_16
unknown

Not on your lists

comp(14321..14911)
DNA (591bp) protein (197aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_trna_2
unknown

Not on your lists

14459..14532
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_420_trna_3
unknown

Not on your lists

15178..15252
DNA (75bp)
transferRNA
13_1_40cm_2_scaffold_420_17
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(15371..16708)
DNA (1338bp) protein (446aa)
integrase n=1 Tax=Desulfobacter curvatus RepID=UPI00036975BD
phage integrase protein (DNA breaking and rejoining enzyme) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
phage integrase protein (DNA breaking and rejoining enzyme)
13_1_40cm_2_scaffold_420_18
unknown

Not on your lists

comp(16795..16890)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_19
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16890..17210)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C7I7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFS29763.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
13_1_40cm_2_scaffold_420_20
unknown

Not on your lists

comp(17217..17321)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_21
unknown

Not on your lists

comp(17315..17659)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_22
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17656..18648)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B666C rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM37954.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthale
13_1_40cm_2_scaffold_420_23
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18620..19186)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003724C1F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO81830.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
13_1_40cm_2_scaffold_420_24
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19183..19674)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UAM1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV18773.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina
hypothetical protein
13_1_40cm_2_scaffold_420_25
unknown

Not on your lists

comp(20409..21623)
DNA (1215bp) protein (405aa)

This feature has no annotations

13_1_40cm_2_scaffold_420_26
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

22133..23236
DNA (1104bp) protein (368aa)
UPI00029708E7 related cluster id=4788494 bin=GWC2_Methylomirabilis_70_16 species=Thermus oshimai genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
putative ATPase (AAA+ superfamily) Tax=GWC2_Rokubacteria_70_16_curated
putative ATPase (AAA+ superfamily)
13_1_40cm_2_scaffold_420_27
unknown

Not on your lists

23349..23528
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

View Taxonomy