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13_1_40cm_2_scaffold_11820

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11820_1
RBG_16_Archaea_50_20_curated, Archaea

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2..307
DNA (306bp) protein (102aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_16_Archaea_50_20_curated
transcription initiation factor TFIID TATA-box-binding protein
13_1_40cm_2_scaffold_11820_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(316..1749)
DNA (1434bp) protein (478aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Ribosomal RNA small subunit methyltransferase n=1 Tax=Brevibacillus borstelensis AK1 RepID=M8EFZ6_9BACL
tRNA/rRNA cytosine-C5-methylase
13_1_40cm_2_scaffold_11820_3
RBG_16_Archaea_50_20_curated, Archaea

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1849..4413
DNA (2565bp) protein (855aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_40cm_2_scaffold_11820_4
RBG_16_Archaea_50_20_curated, Archaea

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4418..5167
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5X6_9CHLR
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_11820_5
RBG_16_Archaea_50_20_curated, Archaea

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5236..6423
DNA (1188bp) protein (396aa)
Carboxypeptidase n=2 Tax=Thermoplasma volcanium RepID=Q97AQ8_THEVO
metal-dependent carboxypeptidase Tax=RBG_16_Archaea_50_20_curated
metal-dependent carboxypeptidase
13_1_40cm_2_scaffold_11820_6
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6488..7552
DNA (1065bp) protein (355aa)
myo-inositol-1-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RBG_13_Bathyarchaeota_38_9_curated
Myo-inositol-1-phosphate synthase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L5T3_KORCO
myo-inositol-1-phosphate synthase
13_1_40cm_2_scaffold_11820_7
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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7549..8325
DNA (777bp) protein (259aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=RBG_16_Thaumarchaeota_49_8_curated
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU50_9ARCH
13_1_40cm_2_scaffold_11820_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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8606..8947
DNA (342bp) protein (114aa)
30S ribosomal protein S25e n=3 Tax=Sulfolobus acidocaldarius RepID=M1IBE2_9CREN
30S ribosomal protein S25 Tax=RBG_13_Bathyarchaeota_38_9_curated
30S ribosomal protein S25e
13_1_40cm_2_scaffold_11820_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8944..9336)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B992_METTP
hypothetical protein; K09143 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_11820_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9337..10458)
DNA (1122bp) protein (374aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RBG_13_Bathyarchaeota_38_9_curated
putative aminotransferase
13_1_40cm_2_scaffold_11820_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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11039..12685
DNA (1647bp) protein (549aa)
Thermosome subunit n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome Tax=RBG_13_Bathyarchaeota_46_16b_curated
ths; archaeal thermosome
Displaying 11 items

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