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13_1_40cm_2_scaffold_2202

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2202_1
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
Succinyl-CoA ligase [ADP-forming] alpha chain (EC:6.2.1.5)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5); K01902 succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] Tax=CG_Arma_01
Succinyl-CoA ligase [ADP-forming] alpha chain n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WK78_9SPIO
13_1_40cm_2_scaffold_2202_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(375..1223)
DNA (849bp) protein (283aa)
putative ribosomal RNA small subunit methyltransferase A; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RBG_16_Archaea_50_20_curated
dimethyladenosine transferase (EC:2.1.1.48)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7V7_METTP
13_1_40cm_2_scaffold_2202_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1228..1389)
DNA (162bp) protein (54aa)
Putative RNA-binding protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C6N0_9CREN
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_2202_4
RBG_16_Archaea_50_20_curated, Archaea

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comp(1377..1751)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1Z8_FERPA
DNA-binding protein; K07572 putative nucleotide binding protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_2202_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(1896..2225)
DNA (330bp) protein (110aa)
RNA polymerase Rpb4; K03051 DNA-directed RNA polymerase subunit F [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
Putative RNA polymerase Rpb4 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJP5_NITGG
13_1_40cm_2_scaffold_2202_6
RBG_16_Archaea_50_20_curated, Archaea

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comp(2225..2524)
DNA (300bp) protein (100aa)
50S ribosomal protein L21e n=2 Tax=Sulfolobus solfataricus RepID=RL21_SULSO
50S ribosomal protein L21; K02889 large subunit ribosomal protein L21e Tax=RBG_16_Archaea_50_20_curated
rpl21E; 50S ribosomal protein L21
13_1_40cm_2_scaffold_2202_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2628..3641
DNA (1014bp) protein (338aa)
methyltransferase-like protein; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] Tax=RBG_13_Bathyarchaeota_46_16b_curated
tRNA (guanine(10)-N2)-dimethyltransferase n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=TMG10_METTH
methyltransferase-like protein
13_1_40cm_2_scaffold_2202_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

3641..4561
DNA (921bp) protein (307aa)
Ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BL2_METBF
ribonuclease Z Tax=RBG_13_Bathyarchaeota_46_16b_curated
13_1_40cm_2_scaffold_2202_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4598..5137)
DNA (540bp) protein (180aa)
pyridoxine/pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEC4_RHOMR
13_1_40cm_2_scaffold_2202_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5212..5451)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Sulfolobales archaeon Acd1 RepID=UPI000362FC74
hypothetical protein; K09736 hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_2202_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5613..6092)
DNA (480bp) protein (160aa)
Dephospho-CoA kinase, CoaE n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUJ5_9ARCH
dephospho-CoA kinase, CoaE Tax=RBG_13_Bathyarchaeota_38_9_curated
dephospho-CoA kinase
13_1_40cm_2_scaffold_2202_12
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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6516..7478
DNA (963bp) protein (321aa)
Cell surface protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YBJ6_DICT6
cell surface protein
Cell surface protein {ECO:0000313|EMBL:ACI18516.1}; TaxID=309799 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 /
13_1_40cm_2_scaffold_2202_13
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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7690..8280
DNA (591bp) protein (197aa)
LigT; 2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=RBG_13_Bathyarchaeota_38_9_curated
2'-5' RNA ligase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TVM2_METKA
LigT; 2'-5' RNA ligase
13_1_40cm_2_scaffold_2202_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


8356..9756
DNA (1401bp) protein (467aa)
tRNA adenylyltransferase (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] Tax=RBG_13_Bathyarchaeota_38_9_curated
CCA-adding enzyme n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RDQ9_METP4
CCA-adding enzyme
13_1_40cm_2_scaffold_2202_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

9732..10505
DNA (774bp) protein (258aa)
Ser/Thr protein kinase id=14428117 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Ser/Thr protein kinase Tax=CSP1_1_Thaumarchaeota
Ser/Thr protein kinase
13_1_40cm_2_scaffold_2202_16
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

Not on your lists

comp(10508..11374)
DNA (867bp) protein (289aa)
ABC transporter permease protein n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ER87_9CREN
ABC transporter permease protein {ECO:0000313|EMBL:BAE95239.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosoca
ABC transporter permease
13_1_40cm_2_scaffold_2202_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(11365..12204)
DNA (840bp) protein (280aa)
ABC transporter n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=Q4LED5_9ARCH
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-2 type transport system protein
13_1_40cm_2_scaffold_2202_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12201..13178)
DNA (978bp) protein (326aa)
Antibiotic transport system ATP-binding protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX0_9BACT
ABC transporter-like protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_2202_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13259..14959)
DNA (1701bp) protein (567aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon GZfos24D9 RepID=Q64C96_9ARCH
DEAD/DEAH box helicase
Displaying 19 items

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