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13_1_40cm_2_scaffold_2205

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2205_1
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..200
DNA (198bp) protein (66aa)
UPI0003CF45CF related cluster n=1 Tax=unknown RepID=UPI0003CF45CF
Peroxidase {ECO:0000313|EMBL:ESY65217.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;
iron-dependent peroxidase
13_1_40cm_2_scaffold_2205_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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285..821
DNA (537bp) protein (179aa)
Putative universal stress protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH54_NITGG
universal stress protein
Putative universal stress protein {ECO:0000313|EMBL:AFU58163.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_1_40cm_2_scaffold_2205_3
unknown

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841..1218
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1239..1463)
DNA (225bp) protein (75aa)
Hypothetical membrane protein Tax=RBG_16_Euryarchaeota_41_19_curated
13_1_40cm_2_scaffold_2205_5
unknown

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1610..1897
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_6
unknown

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comp(2390..2551)
DNA (162bp) protein (54aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_7
RBG_16_Archaea_50_20_curated, Archaea

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2627..3880
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HXK3_PSEUO
Uncharacterized protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_2205_8
unknown

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4014..4205
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_9
unknown

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comp(4467..4829)
DNA (363bp) protein (121aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_10
unknown

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5053..5514
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6435..7049
DNA (615bp) protein (205aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
transposase, IS605 OrfB family
Putative transposase, IS605 OrfB family {ECO:0000313|EMBL:AFU60326.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source=
13_1_40cm_2_scaffold_2205_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7364..7741
DNA (378bp) protein (126aa)
Putative transposase, IS605 OrfB family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFZ7_NITGG
putative transposase IS605 OrfB family
Putative transposase IS605 OrfB family {ECO:0000313|EMBL:AIC15978.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_2_scaffold_2205_13
unknown

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7771..8277
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_14
RBG_16_Archaea_50_20_curated, Archaea

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8304..10364
DNA (2061bp) protein (687aa)
copA; copper-exporting P-type ATPase A (EC:3.6.3.-) Tax=RBG_16_Archaea_50_20_curated
copA; copper-exporting P-type ATPase A (EC:3.6.3.-)
Copper-exporting P-type ATPase A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ63_NITGG
13_1_40cm_2_scaffold_2205_15
GWF2_CPR3_35_18, CPR3, Bacteria

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10628..11023
DNA (396bp) protein (132aa)
id=1903127 bin=GWE2_CPR3_35_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Tax=GWF2_CPR3_35_18
13_1_40cm_2_scaffold_2205_16
unknown

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comp(11076..11405)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(11545..12564)
DNA (1020bp) protein (340aa)
zinc metalloprotease Tax=RBG_16_Archaea_50_20_curated
protease id=14631826 bin=bin9_gal15 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
Zn-dependent protease
13_1_40cm_2_scaffold_2205_18
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12721..13365)
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RH90_METP4
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADN36394.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="
13_1_40cm_2_scaffold_2205_19
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

13459..14370
DNA (912bp) protein (304aa)
sdr-2; glucose/ribitol dehydrogenase family protein (EC:1.1.1.-)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U7A9_9CHLR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH79770.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Kte
13_1_40cm_2_scaffold_2205_20
unknown

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14382..14609
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_21
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

14606..15565
DNA (960bp) protein (320aa)
ABC transporter ATP-binding protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R2X9_METFO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF85592.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_2205_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

15568..16401
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C6B38
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
ABC-2 type transporter
13_1_40cm_2_scaffold_2205_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16410..16631
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C6B38
ABC-2 type transporter; K09686 antibiotic transport system permease protein Tax=RBG_16_Euryarchaeota_67_27_curated
ABC-2 type transporter
13_1_40cm_2_scaffold_2205_24
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16748..18112
DNA (1365bp) protein (455aa)
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79); K01720 2-methylcitrate dehydratase [EC:4.2.1.79] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHT2_9BACT
13_1_40cm_2_scaffold_2205_25
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18124..18963)
DNA (840bp) protein (280aa)
(2R)-phospho-3-sulfolactate synthase (EC:4.4.-.-)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003611442
hypothetical protein Tax=CSP1_8_Deltaproteobacteria
13_1_40cm_2_scaffold_2205_26
unknown

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comp(19104..19382)
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_2_scaffold_2205_27
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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19781..20452
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
Displaying 27 items

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