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13_1_40cm_2_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_260_1
unknown

Not on your lists

1..147
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_2
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(307..1479)
DNA (1173bp) protein (391aa)
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036737D6
hypothetical protein
13_1_40cm_2_scaffold_260_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

1931..3340
DNA (1410bp) protein (470aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RBG_16_Archaea_50_20_curated
glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde-2,1-aminomutase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N756_9ARCH
13_1_40cm_2_scaffold_260_4
unknown

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3417..3971
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_5
RBG_16_Archaea_50_20_curated, Archaea

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4249..5049
DNA (801bp) protein (267aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N6N3_9ARCH
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
transcriptional regulator, TrmB-like
13_1_40cm_2_scaffold_260_6
unknown

Not on your lists

comp(5670..6095)
DNA (426bp) protein (142aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6281..6898
DNA (618bp) protein (206aa)
Putative cyclase family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II01_NITGG
cyclase family protein
Putative cyclase family protein {ECO:0000313|EMBL:AFU57577.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_2_scaffold_260_8
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6968..7861
DNA (894bp) protein (298aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JLU9_TRESO
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KJF26487.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
13_1_40cm_2_scaffold_260_9
Acidianus hospitalis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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7912..9375
DNA (1464bp) protein (488aa)
Aldehyde dehydrogenase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B501_ACIHW
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AEE93166.1}; TaxID=933801 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Acidianus hospitalis (strain W1).;"
13_1_40cm_2_scaffold_260_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(9383..10756)
DNA (1374bp) protein (458aa)
hydroxypyruvate reductase (EC:1.1.1.81); K11529 glycerate 2-kinase [EC:2.7.1.165] Tax=RBG_13_Bathyarchaeota_38_9_curated
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5ZCN9_9CREN
hypothetical protein
13_1_40cm_2_scaffold_260_11
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(10766..11944)
DNA (1179bp) protein (393aa)
Mandelate racemase/muconate lactonizing protein n=2 Tax=Sulfolobus solfataricus RepID=D0KNY8_SULS9
Mandelate racemase {ECO:0000313|EMBL:EZQ07063.1}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" source="Candidatus Acidianus copahuensis.;"
muconate cycloisomerase-like protein
13_1_40cm_2_scaffold_260_12
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12033..12803)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0003002846
phosphoglycolate phosphatase
P-Ser-HPr phosphatase {ECO:0000313|EMBL:EMT50499.1}; TaxID=1300222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
13_1_40cm_2_scaffold_260_13
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12879..15383
DNA (2505bp) protein (835aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3); K01178 glucoamylase [EC:3.2.1.3] Tax=RBG_13_Deltaproteobacteria_65_10_curated
glucan 1,4-alpha-glucosidase (EC:3.2.1.3)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000378F831
13_1_40cm_2_scaffold_260_14
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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15430..17346
DNA (1917bp) protein (639aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=planctomycete KSU-1 RepID=I3IMF6_9PLAN
glycogen branching protein
13_1_40cm_2_scaffold_260_15
Sulfolobus solfataricus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(17356..19170)
DNA (1815bp) protein (605aa)
glycogen synthase (EC:2.4.1.21)
Starch synthase {ECO:0000313|EMBL:ACX92176.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ACX92176.1};; TaxID=555311 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source
Starch synthase n=2 Tax=Sulfolobus solfataricus RepID=D0KTV7_SULS9
13_1_40cm_2_scaffold_260_16
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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19288..19602
DNA (315bp) protein (105aa)
glycoside hydrolase family protein (EC:3.2.1.1)
Glycoside hydrolase, family 57 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DPC0_STAMF
Tax=RBG_13_Bathyarchaeota_52_12_curated
13_1_40cm_2_scaffold_260_17
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

19783..20757
DNA (975bp) protein (325aa)
Glucose 1-dehydrogenase n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L5F4_THEU7
glucose dehydrogenase
Glucose dehydrogenase {ECO:0000313|EMBL:AEA12325.1}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus uzoniensis (s
13_1_40cm_2_scaffold_260_18

Not on your lists

comp(20807..21895)
DNA (1089bp) protein (363aa)
Hydroxyacid oxidase 1 n=1 Tax=mine drainage metagenome RepID=T0Y666_9ZZZZ
Hydroxyacid oxidase 1 {ECO:0000313|EMBL:EQD30616.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative oxidoreductase
13_1_40cm_2_scaffold_260_19
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(21929..22621)
DNA (693bp) protein (231aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_16_KB1_OP1_55_9_curated
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=14426576 bin=bin1_lowGC species=Brevibacillus laterosporus genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
13_1_40cm_2_scaffold_260_20
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(22618..23538)
DNA (921bp) protein (307aa)
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11); K03841 fructose-1,6-bisphosphatase I [EC:3.1.3.11] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
fbp; fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PJ11_9EURY
13_1_40cm_2_scaffold_260_21
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(23576..24685)
DNA (1110bp) protein (370aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_260_22
unknown

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24741..25427
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_23
Caldivirga maquilingensis, Caldivirga, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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25560..26714
DNA (1155bp) protein (385aa)
Glycoside hydrolase 15-related n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8M9R3_CALMQ
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related {ECO:0000313|EMBL:ABW00944.1}; TaxID=397948 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Caldivirga.;" source="Caldivirga maquilinge
13_1_40cm_2_scaffold_260_24
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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26696..27322
DNA (627bp) protein (209aa)
Glycoside hydrolase 15-related protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSM2_METIM
glycoside hydrolase 15-related protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ADG13575.1}; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="
13_1_40cm_2_scaffold_260_25
unknown

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comp(27799..27990)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_26
Methanomassiliicoccus luminyensis, Methanomassiliicoccus, Methanomicrobia, Euryarchaeota, Archaea

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comp(28142..28816)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036369AA
13_1_40cm_2_scaffold_260_27
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29017..29577
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P9S9_LEIXC
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95398.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. M
hypothetical protein
13_1_40cm_2_scaffold_260_28
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(29626..30687)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QR69_ACEAZ
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_260_29
unknown

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31203..31382
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_2_scaffold_260_30
unknown

Not on your lists

comp(31559..32032)
DNA (474bp) protein (158aa)

This feature has no annotations

Displaying items 1-30 of 32 in total

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