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13_1_40cm_2_scaffold_5572

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5572_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2..472
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B70321
fibronectin type III domain-containing protein
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_40cm_2_scaffold_5572_2
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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802..1890
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KXB8_STRRC
putative hydrolase Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphoesterase
13_1_40cm_2_scaffold_5572_3
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

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2151..4859
DNA (2709bp) protein (903aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B1389
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
hypothetical protein
13_1_40cm_2_scaffold_5572_4
unknown

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5083..5748
DNA (666bp) protein (222aa)

This feature has no annotations

13_1_40cm_2_scaffold_5572_5
unknown

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5816..6265
DNA (450bp) protein (150aa)
hypothetical protein
13_1_40cm_2_scaffold_5572_trna_2
unknown

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comp(6298..6421)
DNA (124bp)
transferRNA
13_1_40cm_2_scaffold_5572_6
unknown

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comp(6477..6713)
DNA (237bp) protein (79aa)

This feature has no annotations

13_1_40cm_2_scaffold_5572_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(7611..8894)
DNA (1284bp) protein (428aa)
hisS; histidine--tRNA ligase (EC:6.1.1.21) Tax=RBG_16_Archaea_50_20_curated
Histidyl-tRNA synthetase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAN0_9ARCH
histidyl-tRNA synthetase
13_1_40cm_2_scaffold_5572_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(8952..9518)
DNA (567bp) protein (189aa)
tRNA-splicing endonuclease subunit beta; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_16_Archaea_50_20_curated
tRNA intron endonuclease n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2G4_9ARCH
13_1_40cm_2_scaffold_5572_9
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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9580..10617
DNA (1038bp) protein (346aa)
mtnA; translation initiation factor, aIF-2BI family (EC:5.3.1.23)
aIF-2BI family translation initiation factor id=14427608 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
aIF-2BI family translation initiation factor Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_5572_10
RBG_16_Archaea_50_20_curated, Archaea

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comp(10670..11836)
DNA (1167bp) protein (389aa)
adenine phosphoribosyltransferase; K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RBG_16_Archaea_50_20_curated
PRPP-binding protein, adenine/guanine phosphoribosyltransferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T8W6_9ARCH
Adenine/guanine phosphoribosyltransferase-related PRPP-binding protein
13_1_40cm_2_scaffold_5572_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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11842..12606
DNA (765bp) protein (255aa)
DNA-3-methyladenine glycosylase II id=14428116 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
DNA-3-methyladenine glycosylase II Tax=CSP1_1_Thaumarchaeota
DNA-3-methyladenine glycosylase II
13_1_40cm_2_scaffold_5572_12

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comp(12850..13020)
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:AKA49180.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_2_scaffold_5572_13
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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13820..14272
DNA (453bp) protein (151aa)
Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_5572_14

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comp(14397..14795)
DNA (399bp) protein (133aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=uncultured bacterium W5-77b RepID=H9BWG6_9BACT
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AFD03138.1}; TaxID=1131000 species="Bacteria; environmental samples.;" source="uncultured bacterium W5-77b.;"
hypothetical protein
13_1_40cm_2_scaffold_5572_15
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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15234..16124
DNA (891bp) protein (297aa)
Putative uncharacterized protein PH0309 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58047_PYRHO
hypothetical protein
Putative uncharacterized protein PH0309 {ECO:0000313|EMBL:BAA29382.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horik
13_1_40cm_2_scaffold_5572_16
unknown

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16376..16600
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_5572_17
Mycobacterium chelonae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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17041..17490
DNA (450bp) protein (150aa)
O-methyltransferase n=1 Tax=Mycobacterium abscessus subsp. bolletii BD RepID=H0IVX7_MYCAB
methyltransferase
O-methyltransferase {ECO:0000313|EMBL:EUA69255.1}; TaxID=1299322 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chelonae 1518.;"
13_1_40cm_2_scaffold_5572_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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comp(17577..18206)
DNA (630bp) protein (210aa)
putative N-acetyltransferase id=1245772 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative N-acetyltransferase Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
hypothetical protein
13_1_40cm_2_scaffold_5572_trna_1
unknown

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comp(18468..18567)
DNA (100bp)
transferRNA
13_1_40cm_2_scaffold_5572_19
unknown

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comp(18716..19225)
DNA (510bp) protein (170aa)

This feature has no annotations

13_1_40cm_2_scaffold_5572_20
unknown

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comp(19331..19699)
DNA (369bp) protein (123aa)

This feature has no annotations

Displaying 22 items

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