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13_1_40cm_2_scaffold_670

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_670_1
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3..656)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI000362A8E6
dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
dehydrogenase
13_1_40cm_2_scaffold_670_2
unknown

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comp(653..1960)
DNA (1308bp) protein (436aa)

This feature has no annotations

13_1_40cm_2_scaffold_670_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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2134..3300
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJF7_NITGG
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_670_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3823..5175)
DNA (1353bp) protein (451aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Phosphomannomutase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TA45_9ARCH
phosphoglucosamine mutase
13_1_40cm_2_scaffold_670_5
RBG_16_Archaea_50_20_curated, Archaea

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comp(5212..6255)
DNA (1044bp) protein (348aa)
Gcd1.2; nucleoside-diphosphate-sugar pyrophosphorylase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Archaea_50_20_curated
Nucleotidyl transferase n=1 Tax=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) RepID=A8MC98_CALMQ
nucleotidyl transferase
13_1_40cm_2_scaffold_670_6
unknown

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6371..6970
DNA (600bp) protein (200aa)

This feature has no annotations

13_1_40cm_2_scaffold_670_7
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(7054..7668)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C136_9CREN
Uncharacterized protein {ECO:0000313|EMBL:EHP71132.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis
13_1_40cm_2_scaffold_670_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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8235..9014
DNA (780bp) protein (260aa)
Putative GHMP kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGS5_NITGG
GHMP kinase Tax=RBG_13_Bathyarchaeota_46_16b_curated
GHMP kinase
13_1_40cm_2_scaffold_670_9
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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9089..9769
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QUY7_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49990.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
13_1_40cm_2_scaffold_670_10
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

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9754..10635
DNA (882bp) protein (294aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=RBG_13_Chloroflexi_48_10_curated
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R9H9_AMMDK
13_1_40cm_2_scaffold_670_11
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10640..11563
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae;
2-dehydropantoate 2-reductase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TC11_HELMI
panE; 2-dehydropantoate 2-reductase
13_1_40cm_2_scaffold_670_12
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(11689..11949)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RX12_THEPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL77742.1}; TaxID=368408 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum pendens (strain H
13_1_40cm_2_scaffold_670_13
RIFOXYD1_FULL_OD1_48_21_curated, Parcubacteria, Bacteria

Not on your lists

12441..13034
DNA (594bp) protein (198aa)
Nucleotidyl transferase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSY6_VULDI
nucleotidyl transferase Tax=RIFOXYD1_FULL_OD1_48_21_curated
nucleotidyl transferase
13_1_40cm_2_scaffold_670_14
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

13031..13990
DNA (960bp) protein (320aa)
dTDP-glucose 4,6-dehydratase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=CG_Pacearch_01
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UAI1_FERPD
nucleoside-diphosphate-sugar epimerase
13_1_40cm_2_scaffold_670_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14221..14529)
DNA (309bp) protein (103aa)
Protein translation factor SUI1 homolog n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N3C4_9ARCH
translation initiation factor aSUI1 Tax=RBG_13_Bathyarchaeota_38_9_curated
translation initiation factor SUI1
13_1_40cm_2_scaffold_670_16
unknown

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14945..15193
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_670_17
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(15205..16209)
DNA (1005bp) protein (335aa)
Transcription initiation factor IIB n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U4W7_9ARCH
transcription factor TFIIB cyclin-related protein; K03124 transcription initiation factor TFIIB Tax=RBG_13_Bathyarchaeota_38_9_curated
Transcription initiation factor IIB (TFIIB)
13_1_40cm_2_scaffold_670_trna_1
unknown

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16338..16479
DNA (142bp)
transferRNA
13_1_40cm_2_scaffold_670_18
unknown

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16743..17147
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_40cm_2_scaffold_670_19
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

17178..17756
DNA (579bp) protein (193aa)
cytidyltransferase (EC:2.7.7.3) Tax=RBG_16_Bathyarchaeota_57_9_curated
cytidyltransferase (EC:2.7.7.3)
Cytidyltransferase-related domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GWL3_METFV
13_1_40cm_2_scaffold_670_20
unknown

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comp(17784..18167)
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 21 items

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