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13_1_40cm_2_scaffold_113_12

Organism: 13_1_40CM_2_Archaea_52_13

partial RP 19 / 55 MC: 4 BSCG 6 / 51 ASCG 17 / 38 MC: 1
Location: comp(9127..9783)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 216.0
  • Bit_score: 215
  • Evalue 1.00e-52
Ribonuclease HII n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RNH2_THESM similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 222.0
  • Bit_score: 211
  • Evalue 7.90e-52
ribonuclease HII similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 216.0
  • Bit_score: 215
  • Evalue 2.00e-53

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Taxonomy

Thermococcus paralvinellae → Thermococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 657
ATGAAAGTCTGTGGCGTCGACGATGCGGGAAGAGGCCCAGTTATCGGCCCCTTGGTCATAGCTGGGGTGATAATCGAAGAGGAGAAGCTTGACAGATTGAAGAGGCTTGGAGTGAAAGACTCGAAGCAACTCCTCTCATCCACCAGGACTCGTCTCTCCAAGGAGATTCCCAGCGTAGTCGATGATTACCACGTTCTAGAAATAGGAGCACAAGAGTTGGACAGGATAGTGAACCGCGCTCCAAAGTTCCAGAGGCTGAACCTGCTGGAAGCGAAAGTGATGGCGCAGGTAATAGAGAAGTTGAGGCCGGAGTTGGCCTATGTCGATTCGTCGGATACTCGGACAGAGCGGTTCAAGAACAACATACTAGACTGTCTCTCCTTCACTCCACGAATAGTCTCGGAACACAAAGCAGACATCAACTATCCTGTAGTCTCCGCGGCCAGCATCATGGCAAAGGTCCACCGAGACGCAAGAATTGAGGAGATCAAAAAGGAATACGGGGAGATTGGTTCAGGGTATGCTCATGACGCTTTGACGGTGAAATTCCTGCGAGACTATTACTCCGACCATGGAGATTTTCCACCGATCGTCCGCCGTTCGTGGAAGACTCTGGGAAACATTGTTCGAGACTTGACGCAGTCTACGCTTCTATAG
PROTEIN sequence
Length: 219
MKVCGVDDAGRGPVIGPLVIAGVIIEEEKLDRLKRLGVKDSKQLLSSTRTRLSKEIPSVVDDYHVLEIGAQELDRIVNRAPKFQRLNLLEAKVMAQVIEKLRPELAYVDSSDTRTERFKNNILDCLSFTPRIVSEHKADINYPVVSAASIMAKVHRDARIEEIKKEYGEIGSGYAHDALTVKFLRDYYSDHGDFPPIVRRSWKTLGNIVRDLTQSTLL*