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13_1_40cm_2_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_113_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(1..1191)
DNA (1191bp) protein (397aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated
ATP-dependent helicase n=1 Tax=uncultured archaeon RepID=Q6MZB0_9ARCH
DEAD/DEAH box helicase
13_1_40cm_2_scaffold_113_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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1362..1721
DNA (360bp) protein (120aa)
Transcriptional regulator, PadR family n=2 Tax=Clostridiales RepID=B0NE98_CLOSV
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_38_9_curated
PadR-like family transcriptional regulator
13_1_40cm_2_scaffold_113_3
unknown

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1737..2504
DNA (768bp) protein (256aa)

This feature has no annotations

13_1_40cm_2_scaffold_113_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2623..3318
DNA (696bp) protein (232aa)
TATA-box-binding protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV1_9CREN
tbp; TATA-box-binding protein Tax=RBG_13_Bathyarchaeota_38_9_curated
tbp; TATA-box-binding protein
13_1_40cm_2_scaffold_113_5
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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3336..3869
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSB6_VULDI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN49509.1}; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Vulcanisaeta.;" source="Vulcanisaeta distributa (s
13_1_40cm_2_scaffold_113_6
unknown

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3925..4128
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_113_7
RBG_16_Archaea_50_20_curated, Archaea

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comp(4786..5184)
DNA (399bp) protein (133aa)
PilT domain-containing protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_113_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(5188..5418)
DNA (231bp) protein (77aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_113_9
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(5564..7195)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q573_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CAJ75169.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="C
TonB-dependent receptor
13_1_40cm_2_scaffold_113_10
unknown

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comp(8049..8294)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_2_scaffold_113_11
unknown

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comp(8513..8902)
DNA (390bp) protein (130aa)

This feature has no annotations

13_1_40cm_2_scaffold_113_12
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(9127..9783)
DNA (657bp) protein (219aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=582419 species="Archaea; Euryarchaeota; Th
Ribonuclease HII n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=RNH2_THESM
ribonuclease HII
13_1_40cm_2_scaffold_113_13
Thermofilum pendens, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9780..10322)
DNA (543bp) protein (181aa)
Nucleoside-triphosphatase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796}; Short=NTPase THEP1 {ECO:0000255|HAMAP-Rule:MF_00796};; EC=3.6.1.15 {ECO:0000255|HAMAP-Rule:MF_00796};; Nucleoside triphosphate phosph
Nucleoside-triphosphatase THEP1 n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=NTPTH_THEPD
putative NTPase
13_1_40cm_2_scaffold_113_14
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10331..10972)
DNA (642bp) protein (214aa)
ribosomal RNA methyltransferase RrmJ/FtsJ; K02427 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] Tax=RBG_13_Bathyarchaeota_38_9_curated
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=RLME_METTH
cell division protein J
13_1_40cm_2_scaffold_113_15
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists


comp(10988..11329)
DNA (342bp) protein (114aa)
Methionine--tRNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5Y7_THEAS
methionyl-tRNA synthetase; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
methionyl-tRNA synthetase
13_1_40cm_2_scaffold_113_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11372..12646)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVJ9_ROSS1
peptidase M16 domain-containing protein
13_1_40cm_2_scaffold_113_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12636..13949)
DNA (1314bp) protein (438aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase M16 domain protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B202_HERA2
peptidase M16 domain-containing protein
13_1_40cm_2_scaffold_113_18
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

Not on your lists

comp(13979..14581)
DNA (603bp) protein (201aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_40cm_2_scaffold_113_19
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

14698..15909
DNA (1212bp) protein (404aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_40cm_2_scaffold_113_20
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15955..17967
DNA (2013bp) protein (671aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_113_21
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(18325..19089)
DNA (765bp) protein (255aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CWL2_METMJ
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
coenzyme F420-0 gamma-glutamyl ligase
13_1_40cm_2_scaffold_113_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(19097..20644)
DNA (1548bp) protein (516aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJ38_PETMO
13_1_40cm_2_scaffold_113_23
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20697..22271)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_1_40cm_2_scaffold_113_24
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22385..23305)
DNA (921bp) protein (307aa)
Probable imidazolonepropionase n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T822_9EURY
imidazolonepropionase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_40cm_2_scaffold_113_25
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(23675..24703)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_2_scaffold_113_26
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24977..26146)
DNA (1170bp) protein (390aa)
Nitroreductase n=2 Tax=Bacillus thuringiensis RepID=C3FDK2_BACTU
Nitroreductase {ECO:0000313|EMBL:EEM86226.1}; TaxID=527028 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar pu
noxC; NADH oxidase
13_1_40cm_2_scaffold_113_27
unknown

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26420..26554
DNA (135bp) protein (45aa)

This feature has no annotations

13_1_40cm_2_scaffold_113_28

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comp(26581..27048)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S06H3_C01604 {ECO:0000313|EMBL:GAH98155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
13_1_40cm_2_scaffold_113_29
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists


comp(27598..28908)
DNA (1311bp) protein (437aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7D951_STAHD
rRNA biogenesis protein Nop56/Nop58; K14564 nucleolar protein 56 Tax=RBG_13_Bathyarchaeota_38_9_curated
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
13_1_40cm_2_scaffold_113_30
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

29094..29933
DNA (840bp) protein (280aa)
dihydroorotate dehydrogenase family protein (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrD; dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I5V0_METCZ
Displaying items 1-30 of 97 in total

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