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13_1_40cm_2_scaffold_28389_13

Organism: 13_1_40CM_2_Archaea_52_13

partial RP 19 / 55 MC: 4 BSCG 6 / 51 ASCG 17 / 38 MC: 1
Location: comp(7960..8418)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=RBG_13_Bathyarchaeota_46_16b_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 130.0
  • Bit_score: 176
  • Evalue 2.80e-41
Probable tRNA pseudouridine synthase B n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=TRUB_METKA similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 130.0
  • Bit_score: 173
  • Evalue 1.70e-40
TruB; H/ACA RNA-protein complex component Cbf5p similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 130.0
  • Bit_score: 173
  • Evalue 4.70e-41

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Taxonomy

RBG_13_Bathyarchaeota_46_16b_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 459
ATGGTCACAGGCGTGCTTCCTCTAGCTCTGGAAGATGCAACAAAAACAATCCAGGCTTTCCTACTTACCGGCAAAGAATACGTCTGCCTGATGGCGCTCCACGGTGACGTGGAAGAGAAGAAAATCCAAACAGTGCTCGAAGAGTTCGTCGAGGACATTCTTCAGAGGCCCCCTGTCAGAGCCGCAGTGAGGAGAGATGTGAGAAAAAGGAGAATCTACTACATTCGAGACATTGAGACGGATGGCCGCGACGTTCTGTTCAGGGTCGGATGTCAGGCAGGAACCTACATTCGGAAACTCGTCTACGACGTTGGCGAGGTACTTGCAGTTGGTGCCCATATGCGTGAACTTCGACGGACCCGGGCGGGAAGCTTCACCGGAGAGAGAAGTGTTGGCGAGACGAATGGTGAAACCGATGGAGTCAGCCTTCGAGTATGTCCCACGGATCTACATTCGTGA
PROTEIN sequence
Length: 153
MVTGVLPLALEDATKTIQAFLLTGKEYVCLMALHGDVEEKKIQTVLEEFVEDILQRPPVRAAVRRDVRKRRIYYIRDIETDGRDVLFRVGCQAGTYIRKLVYDVGEVLAVGAHMRELRRTRAGSFTGERSVGETNGETDGVSLRVCPTDLHS*