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13_1_40cm_2_scaffold_1165

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1165_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1..1146
DNA (1146bp) protein (382aa)
Ni,Fe-hydrogenase I large subunit {ECO:0000313|EMBL:CDM67016.1}; EC=1.12.99.6 {ECO:0000313|EMBL:CDM67016.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;"
hydrogen:quinone oxidoreductase (EC:1.12.5.1)
Hydrogen:quinone oxidoreductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01S92_SOLUE
13_1_40cm_2_scaffold_1165_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2212..3882
DNA (1671bp) protein (557aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cys
Sensor protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FN37_STIAD rbh
sensor protein
13_1_40cm_2_scaffold_1165_3
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3883..4239)
DNA (357bp) protein (119aa)
Response regulator receiver protein n=2 Tax=Anaeromyxobacter RepID=B4UFZ6_ANASK
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACL64377.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
13_1_40cm_2_scaffold_1165_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4307..5239
DNA (933bp) protein (311aa)
Integral membrane protein, TerC family n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08XR2_STIAD
hypothetical protein
Integral membrane protein, TerC family {ECO:0000313|EMBL:ADO73424.1}; Membrane protein, TerC family {ECO:0000313|EMBL:EAU65294.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria;
13_1_40cm_2_scaffold_1165_5
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5267..6574)
DNA (1308bp) protein (436aa)
Glycoside hydrolase family 1 n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LL61_HALO1 rbh
glycoside hydrolase rbh
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ACY18557.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Halia
13_1_40cm_2_scaffold_1165_6
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6586..7515)
DNA (930bp) protein (310aa)
Pirin-like protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQ27_9GAMM
Pirin-like protein {ECO:0000313|EMBL:EAR22182.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis
pirin domain-containing protein
13_1_40cm_2_scaffold_1165_7
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

7598..8071
DNA (474bp) protein (158aa)
MarR family transcriptional regulatory protein id=4047548 bin=GWC2_Nitrospirae_57_13 species=Gloeocapsa sp. PCC 7428 genus=Gloeocapsa taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transcriptional regulator, MarR family Tax=GWC2_Nitrospirae_57_13_curated
MarR family transcriptional regulator
13_1_40cm_2_scaffold_1165_8
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8088..8930)
DNA (843bp) protein (281aa)
Intradiol ring-cleavage dioxygenase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JUH6_BURP8
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ACC74698.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkho
13_1_40cm_2_scaffold_1165_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8918..9934)
DNA (1017bp) protein (339aa)
Inner-membrane translocator n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1D1_VARPS rbh
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACS22701.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source=
13_1_40cm_2_scaffold_1165_10
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9931..10794)
DNA (864bp) protein (288aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036B5362 rbh
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:EJL71665.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholde
putative branched-chain amino acid ABC transporter, permease protein
13_1_40cm_2_scaffold_1165_11
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10797..11495)
DNA (699bp) protein (233aa)
ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI00037943B5 rbh
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EJL71666.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderi
putative branched-chain amino acid ABC transporter, ATP-binding protein
13_1_40cm_2_scaffold_1165_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11498..12220)
DNA (723bp) protein (241aa)
Putative branched-chain amino acid ABC transporter, ATP-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XMW0_VARPD rbh
putative branched-chain amino acid ABC transporter, ATP-binding protein
Putative branched-chain amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGU53599.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadac
13_1_40cm_2_scaffold_1165_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12223..13455)
DNA (1233bp) protein (411aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J2KEV6_9BURK rbh
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL71668.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative substrate-binding component of ABC transporter
13_1_40cm_2_scaffold_1165_14
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13452..14483)
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, class IV n=1 Tax=Variovorax sp. CF313 RepID=J2KET3_9BURK rbh
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:EJL71643.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp
13_1_40cm_2_scaffold_1165_15
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14480..15136)
DNA (657bp) protein (219aa)
pcaJ; 3-oxoadipate CoA-transferase subunit B (EC:2.8.3.6)
3-oxoadipate CoA-transferase subunit B n=1 Tax=Herbaspirillum sp. GW103 RepID=I3CRW1_9BURK rbh
3-oxoadipate CoA-transferase subunit B {ECO:0000313|EMBL:EIJ46354.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="
13_1_40cm_2_scaffold_1165_16
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15133..15792)
DNA (660bp) protein (220aa)
pcaI; 3-oxoadipate CoA-transferase subunit A (EC:2.8.3.5)
3-oxoadipate CoA-transferase subunit A n=1 Tax=Janthinobacterium lividum RepID=UPI000288B43B
3-oxoadipate CoA-transferase {ECO:0000313|EMBL:KHD20105.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
13_1_40cm_2_scaffold_1165_17
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15795..17270)
DNA (1476bp) protein (492aa)
betaine-aldehyde dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036488A5 rbh
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:KAK47917.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholder
putative aldehyde dehydrogenase
13_1_40cm_2_scaffold_1165_18
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17280..17624)
DNA (345bp) protein (115aa)
4-nitrocatechol monooxygenase ferridoxin protein n=1 Tax=Burkholderia terrae BS001 RepID=I5CFF2_9BURK
4-nitrocatechol monooxygenase ferridoxin protein {ECO:0000313|EMBL:EIM94620.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;"
Rieske [2Fe-2S] domain-containing protein
13_1_40cm_2_scaffold_1165_19
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17626..18654)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JUH3_BURP8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACC74695.1}; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phyma
13_1_40cm_2_scaffold_1165_20
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18666..19160)
DNA (495bp) protein (165aa)
Hydroquinone dioxygenase small subunit n=1 Tax=Burkholderia sp. SJ98 RepID=K8R878_9BURK
Hydroxyquinol 1,2-dioxygenase {ECO:0000313|EMBL:KAK43556.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderi
hydroquinone dioxygenase small subunit
13_1_40cm_2_scaffold_1165_21
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19368..20054
DNA (687bp) protein (229aa)
IclR family transcriptional regulator n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003001DDE rbh
Beta-ketoadipate pathway transcriptional regulator PcaR/PcaU, IclR family {ECO:0000313|EMBL:KIG10362.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
IclR family transcriptional regulator
13_1_40cm_2_scaffold_1165_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20051..21295
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003664B48 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ88902.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum
13_1_40cm_2_scaffold_1165_23
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(21300..21773)
DNA (474bp) protein (158aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Brevibacillus sp. phR RepID=UPI0002E80280
3-demethylubiquinone-9 3-methyltransferase Tax=RBG_16_Chloroflexi_52_11_curated
3-demethylubiquinone-9 3-methyltransferase
13_1_40cm_2_scaffold_1165_24
R_OP3X_51_18, OP3X, Bacteria

Not on your lists

21967..23787
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000372BC00
beta-lactamase
Tax=RIFCSPHIGHO2_02_FULL_OP3X_51_18_curated
13_1_40cm_2_scaffold_1165_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23784..24227
DNA (444bp) protein (148aa)
transcriptional regulator, MarR family protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41A7
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA31357.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera a
13_1_40cm_2_scaffold_1165_26
Candidatus Latescibacter anaerobius, Candidatus Latescibacter, Latescibacteria, Bacteria

Not on your lists

comp(24281..24733)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6EA4C
13_1_40cm_2_scaffold_1165_27
unknown

Not on your lists

comp(24833..25216)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_40cm_2_scaffold_1165_28
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(25304..26242)
DNA (939bp) protein (313aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYR0_9BACT
secretion protein HlyD Tax=RBG_16_Acidobacteria_70_10_curated
HlyD-like secretion protein
13_1_40cm_2_scaffold_1165_29
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(26268..26957)
DNA (690bp) protein (230aa)
ABC transporter related n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYQ9_9BACT
ABC transporter related {ECO:0000313|EMBL:EES52344.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
ABC-type export system ATPase component DevA family
13_1_40cm_2_scaffold_1165_30
Leptospirillum sp. Group IV, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(26967..28094)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Leptospirillum sp. Group IV 'UBA BS' RepID=T0XM36_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD23881.1}; TaxID=1260983 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum sp. Group IV 'UBA BS'.;"
ABC transporter permease
Displaying items 1-30 of 31 in total

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