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13_1_40cm_2_scaffold_2029

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2029_1
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..888
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JL04_SYNJB
gliding motility ABC transporter auxillary protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
hypothetical protein
13_1_40cm_2_scaffold_2029_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

896..2332
DNA (1437bp) protein (479aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XY6_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85479.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_2_scaffold_2029_3
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2329..3186
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=B5GME0_STRC2
Putative uncharacterized protein {ECO:0000313|EMBL:EDY47486.1}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (
hypothetical protein
13_1_40cm_2_scaffold_2029_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3271..3522
DNA (252bp) protein (84aa)
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase
DNA-directed RNA polymerase subunit omega n=3 Tax=Anaeromyxobacter RepID=RPOZ_ANAD2
DNA-directed RNA polymerase subunit omega
13_1_40cm_2_scaffold_2029_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3805..4467)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGP5_ANADF
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_2029_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4464..5057)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IFK2_ANADE
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_2029_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5483..5815
DNA (333bp) protein (111aa)
60 kDa chaperonin n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J6T9_ANAD2
groEL; chaperonin GroEL; K04077 chaperonin GroEL Tax=RBG_16_Anaeromyxobacter_69_14_curated
groEL; chaperonin GroEL
13_1_40cm_2_scaffold_2029_8
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

comp(6027..6296)
DNA (270bp) protein (90aa)
Secreted protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y971_9FIRM
Putative mucin-5ac Tax=RBG_16_Armatimonadetes_58_9_curated
13_1_40cm_2_scaffold_2029_9
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6689..6997
DNA (309bp) protein (103aa)
60 kDa chaperonin n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UF39_MYXSD
chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1406225 spec
13_1_40cm_2_scaffold_2029_10
unknown

Not on your lists

comp(7064..7582)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_11
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7613..8362
DNA (750bp) protein (250aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIP3_ANASK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACG74076.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaer
13_1_40cm_2_scaffold_2029_12
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8385..8636
DNA (252bp) protein (84aa)
Glutaredoxin 3 n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B579_PARDP
glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ABL70673.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (st
13_1_40cm_2_scaffold_2029_13
unknown

Not on your lists

comp(8630..9163)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_14
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9170..9625
DNA (456bp) protein (152aa)
Putative lipoprotein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U6Y4_9DELT
Putative lipoprotein {ECO:0000313|EMBL:ERK90768.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcu
lipoprotein
13_1_40cm_2_scaffold_2029_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9625..10656
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQX1_9BACT
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_2029_16
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

10825..11940
DNA (1116bp) protein (372aa)
Acyl-CoA thioesterase 11 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) RepID=E9C4S4_CAPO3
Acyl-CoA thioesterase 11 {ECO:0000313|EMBL:KJE91945.1}; TaxID=595528 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki (strain ATCC 30864).;"
thioesterase
13_1_40cm_2_scaffold_2029_17
unknown

Not on your lists

11937..12134
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_18
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12165..12845)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
Uncharacterized protein id=2881296 bin=GWA1_Deltaproteobacteria_52_35 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
13_1_40cm_2_scaffold_2029_19
unknown

Not on your lists

comp(12930..13625)
DNA (696bp) protein (232aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_20
unknown

Not on your lists

comp(13730..14023)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_21
unknown

Not on your lists

comp(14023..14277)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_22
unknown

Not on your lists

comp(14395..14688)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_2029_23
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14956..16209
DNA (1254bp) protein (418aa)
Fis family two component sigma-54 specific transcriptional regulator id=14624729 bin=bin5_DeltaP species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Fis family two component sigma-54 specific transcriptional regulator Tax=CSP1_8_Deltaproteobacteria
Fis family two component sigma-54 specific transcriptional regulator
13_1_40cm_2_scaffold_2029_24
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16297..17901)
DNA (1605bp) protein (535aa)
Twitching motility protein PilT n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P023_9DELT rbh
twitching motility protein; K02669 twitching motility protein PilT Tax=RBG_16_Anaeromyxobacter_69_14_curated
twitching motility protein
13_1_40cm_2_scaffold_2029_25
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17903..18421)
DNA (519bp) protein (173aa)
Response regulator receiver protein id=4487126 bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
response regulator receiver domain-containing protein Tax=GWC2_Pelobacteraceae_58_13_curated
response regulator
13_1_40cm_2_scaffold_2029_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(18418..19521)
DNA (1104bp) protein (368aa)
histidine kinase id=14430125 bin=bin3_NC10 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=bin3_NC10 organism_group=NC10
histidine kinase Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_2029_27
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(19518..20072)
DNA (555bp) protein (185aa)
Response regulator receiver protein id=2154071 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
response regulator receiver domain-containing protein Tax=GWB2_Nitrospirae_47_37_curated
response regulator receiver protein
13_1_40cm_2_scaffold_2029_28
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20247..21071
DNA (825bp) protein (275aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Ox
Signal transduction histidine kinase with CheB and CheR activity n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PAW7_9BURK
sensory box protein
13_1_40cm_2_scaffold_2029_29
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21068..22363
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
Histidine kinase,Response regulator receiver domain protein,GAF/HAMP domain-containing protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2LGE1_9BURK
protein serine/threonine phosphatase with extracellular sensor
Displaying 29 items

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