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13_1_40cm_2_scaffold_21699

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_21699_1
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(63..1106)
DNA (1044bp) protein (348aa)
Oxidoreductase domain protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
Putative Oxidoreductase domain protein id=3383820 bin=GWA1_Deltaproteobacteria_52_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
Oxidoreductase domain protein
13_1_40cm_2_scaffold_21699_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1191..1661
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_21699_3
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1662..2990)
DNA (1329bp) protein (443aa)
Serine/threonine protein kinase Pkn2 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEX3_9DELT
pkn2; serine/threonine protein kinase Pkn2 Tax=RBG_16_Deltaproteobacteria_71_12_curated
serine/threonine protein kinase Pkn2
13_1_40cm_2_scaffold_21699_4
unknown

Not on your lists

comp(2987..3256)
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_40cm_2_scaffold_21699_5
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..4841)
DNA (1545bp) protein (515aa)
Peptide chain release factor 3 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PQ38_9DELT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltapr
prfC; peptide chain release factor 3
13_1_40cm_2_scaffold_21699_trna_1
unknown

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comp(4916..4995)
DNA (80bp)
transferRNA
13_1_40cm_2_scaffold_21699_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

5093..5614
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEQ3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_2_scaffold_21699_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5620..5796)
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
13_1_40cm_2_scaffold_21699_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

5938..6474
DNA (537bp) protein (179aa)
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1) Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1)
Similar to Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG49_9BACT
13_1_40cm_2_scaffold_21699_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6477..7259
DNA (783bp) protein (261aa)
petB; cytochrome b6 id=14429794 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
petB; cytochrome b6 Tax=CSP1_5_NC10
petB; cytochrome b6
13_1_40cm_2_scaffold_21699_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7274..8095
DNA (822bp) protein (274aa)
hypothetical protein id=14429795 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_21699_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8142..11417
DNA (3276bp) protein (1092aa)
Hypothetical octaheam cytochrome c n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG46_9BACT
octaheme cytochrome c Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
octaheme cytochrome c
13_1_40cm_2_scaffold_21699_12
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11485..12183
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XUY6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:KFE72386.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_40cm_2_scaffold_21699_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12308..13336
DNA (1029bp) protein (343aa)
cytochrome oxidase assembly; K02259 cytochrome c oxidase assembly protein subunit 15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Cytochrome oxidase assembly id=2974177 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cytochrome oxidase assembly family protein
13_1_40cm_2_scaffold_21699_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13333..14193
DNA (861bp) protein (287aa)
ctaB; Protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XII3_SORCE
Heme O synthase, protoheme IX farnesyltransferase {ECO:0000313|EMBL:AKF10682.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sanda
13_1_40cm_2_scaffold_21699_15
unknown

Not on your lists

14277..14534
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_2_scaffold_21699_16
RLO_PLX_64_10, Bacteria

Not on your lists

14551..15261
DNA (711bp) protein (237aa)
cyoA; Heme/copper-type cytochrome oxidase, subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Cytochrome c oxidase subunit II id=4406650 bin=GWA2_OP3_52_12 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cyoA; Heme/copper-type cytochrome oxidase, subunit 2
Displaying 17 items

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