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13_1_40cm_2_scaffold_21080

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_21080_trna_1
unknown

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comp(5..78)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_21080_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(145..426)
DNA (282bp) protein (94aa)
Integration host factor subunit alpha n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IHFA_ANADF
integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxoco
13_1_40cm_2_scaffold_21080_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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524..1195
DNA (672bp) protein (224aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Fischerella muscicola RepID=UPI0002FF80D7
methionine-S-sulfoxide reductase
13_1_40cm_2_scaffold_21080_3
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1217..1798
DNA (582bp) protein (194aa)
2-hydroxychromene-2-carboxylate isomerase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09B82_STIAD
2-hydroxychromene-2-carboxylate isomerase family protein
2-hydroxychromene-2-carboxylate isomerase family protein {ECO:0000313|EMBL:EAU68955.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
13_1_40cm_2_scaffold_21080_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1795..4188)
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBJ1_ANADF rbh
pheT; phenylalanyl-tRNA synthetase subunit beta
13_1_40cm_2_scaffold_21080_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4185..5255)
DNA (1071bp) protein (357aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAN8_ANASK
13_1_40cm_2_scaffold_21080_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5330..5674)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIW1_9DELT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
rplT; 50S ribosomal protein L20
13_1_40cm_2_scaffold_21080_7
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5761..5970)
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RL35_SYNAS
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
13_1_40cm_2_scaffold_21080_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6035..6562)
DNA (528bp) protein (176aa)
Translation initiation factor IF-3 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IF3_ANADF
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_2_scaffold_21080_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6931..8592)
DNA (1662bp) protein (554aa)
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=SYT_ANADE rbh
13_1_40cm_2_scaffold_21080_10
unknown

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9116..9331
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 11 items

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