ggKbase home page

13_1_40cm_2_scaffold_2268

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2268_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1..1527
DNA (1527bp) protein (509aa)
cyoB; Heme/copper-type cytochrome oxidase, subunit 1; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Cytochrome-c oxidase id=2731962 bin=GWC2_Ignavibacteria_56_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cyoB; Heme/copper-type cytochrome oxidase, subunit 1
13_1_40cm_2_scaffold_2268_2
RLO_PLX_64_10, Bacteria

Not on your lists

1529..2140
DNA (612bp) protein (204aa)
cytochrome oxidase subunit III n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3812F
Cytochrome c oxidase, subunit III Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cytochrome c oxidase subunit III
13_1_40cm_2_scaffold_2268_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2148..2462
DNA (315bp) protein (105aa)
caa(3)-type oxidase subunit IV Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Caa(3)-type oxidase, subunit IV id=4406653 bin=GWA2_OP3_52_12 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_2_scaffold_2268_4
RLO_PLX_64_10, Bacteria

Not on your lists

2463..2669
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B654B6
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
13_1_40cm_2_scaffold_2268_5
unknown

Not on your lists

2669..2857
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_2268_6
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2793..3872)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034C7013
SAM-dependent methyltransferase UbiE/COQ5 family
SAM-dependent methyltransferase UbiE/COQ5 family {ECO:0000313|EMBL:AHB87824.1}; TaxID=1394889 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="The
13_1_40cm_2_scaffold_2268_7
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3924..4688
DNA (765bp) protein (255aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=926566 specie
NAD-dependent protein deacylase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZEE8_TERRK
NAD-dependent protein deacetylase, SIR2 family
13_1_40cm_2_scaffold_2268_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4688..5863
DNA (1176bp) protein (392aa)
MOFRL domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7H1_ANADF
MOFRL domain-containing protein
MOFRL domain protein {ECO:0000313|EMBL:ABS24667.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
13_1_40cm_2_scaffold_2268_9
unknown

Not on your lists

5878..6432
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_2_scaffold_2268_10
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6426..6878)
DNA (453bp) protein (151aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burk
Phosphodiesterase, MJ0936 family n=1 Tax=Burkholderia sp. YI23 RepID=G8M743_9BURK
phosphodiesterase, MJ0936 family
13_1_40cm_2_scaffold_2268_11
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6900..7460
DNA (561bp) protein (187aa)
tRNA-(MS[2]IO[6]A)-hydroxylase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DCV0_MYXXD
miaE; tRNA-(MS[2]IO[6]A)-hydroxylase
tRNA-(MS[2]IO[6]A)-hydroxylase {ECO:0000313|EMBL:ABF92447.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="
13_1_40cm_2_scaffold_2268_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7440..9830)
DNA (2391bp) protein (797aa)
ATP-dependent helicase HrpB n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEC4_ANASK rbh
ATP-dependent helicase HrpB
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ACG72071.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
13_1_40cm_2_scaffold_2268_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10200..10985)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB22_ANASK rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71670.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_2268_14
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10985..11779)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB21_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG71669.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_2268_15
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11776..12753)
DNA (978bp) protein (326aa)
ABC transporter ATP-binding protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUL4_CORCM rbh
natA1; ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFE09579.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;"
13_1_40cm_2_scaffold_2268_16
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12824..14374)
DNA (1551bp) protein (517aa)
Methyl accepting chemotaxis protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U5D8_9DELT rbh
methyl-accepting chemotaxis protein
Methyl accepting chemotaxis protein {ECO:0000313|EMBL:ERK90128.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
13_1_40cm_2_scaffold_2268_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14383..15444)
DNA (1062bp) protein (354aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1406225 species="Bacteria; Proteobacteria; Delta
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJV8_MYXFH rbh
putative protein-glutamate methylesterase CheB
13_1_40cm_2_scaffold_2268_18
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15441..15968)
DNA (528bp) protein (176aa)
Chemotaxis sensor histidine kinase/response regulator n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UNB0_MYXSD
chemotaxis sensor histidine kinase/response regulator
Chemotaxis sensor histidine kinase/response regulator {ECO:0000313|EMBL:AGC47929.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae
13_1_40cm_2_scaffold_2268_19
unknown

Not on your lists

16078..17043
DNA (966bp) protein (322aa)

This feature has no annotations

Displaying 19 items

View Taxonomy