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13_1_40cm_2_scaffold_25669

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_25669_1
unknown

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comp(2..67)
DNA (66bp) protein (22aa)

This feature has no annotations

13_1_40cm_2_scaffold_25669_2
R_Proteobacteria_53_8, Proteobacteria, Bacteria

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comp(85..492)
DNA (408bp) protein (136aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
Cobalamin B12-binding domain protein n=1 Tax=mine drainage metagenome RepID=E6PSD0_9ZZZZ
cobalamin B12-binding domain-containing protein
13_1_40cm_2_scaffold_25669_3

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634..1401
DNA (768bp) protein (256aa)
Transcriptional regulator-like protein protein n=1 Tax=mine drainage metagenome RepID=E6PSC3_9ZZZZ
Transcriptional regulator-like protein protein {ECO:0000313|EMBL:CBH97830.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
GntR family transcriptional regulator
13_1_40cm_2_scaffold_25669_4
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1412..1861
DNA (450bp) protein (150aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JED3_ANAD2
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ACL64259.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobact
13_1_40cm_2_scaffold_25669_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2016..2522
DNA (507bp) protein (169aa)
Extracellular ligand-binding receptor n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCY2_GEOOG
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_16_Anaeromyxobacter_69_14_curated
extracellular ligand-binding receptor
13_1_40cm_2_scaffold_25669_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2474..3091
DNA (618bp) protein (206aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEY5_DESTA
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_40cm_2_scaffold_25669_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3092..3970
DNA (879bp) protein (293aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCX7_INTC7
amino acid ABC transporter; K01997 branched-chain amino acid transport system permease protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
amino acid ABC transporter
13_1_40cm_2_scaffold_25669_8
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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3974..4846
DNA (873bp) protein (291aa)
Putative amino-acid transmembrane ABC transporter protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACH0_COLFT
putative amino-acid transmembrane ABC transporter protein; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Gallionellales_56_9_curated
livM; Branched-chain amino acid transport system permease protein LivM
13_1_40cm_2_scaffold_25669_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4843..5601
DNA (759bp) protein (253aa)
ABC transporter related n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEI8_METS4
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein; K01998 branched-chain amino acid transport system permease protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_25669_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5598..6335
DNA (738bp) protein (246aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QCI9_9FIRM
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Anaeromyxobacter_69_14_cur
branched-chain amino acid transporter ATP-binding protein
13_1_40cm_2_scaffold_25669_11
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6341..7441
DNA (1101bp) protein (367aa)
Malate dehydrogenase (EC:1.1.1.37)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EB4642 rbh
Dehydrogenase {ECO:0000313|EMBL:KJK21996.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
13_1_40cm_2_scaffold_25669_12
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7452..8117)
DNA (666bp) protein (222aa)
pilz-like type IV pilus assembly protein; K02676 type IV pilus assembly protein PilZ Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_40cm_2_scaffold_25669_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8386..8592)
DNA (207bp) protein (69aa)
Cold-shock DNA-binding domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMR5_ANASK
cold-shock DNA-binding domain-containing protein
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ACG74511.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaerom
13_1_40cm_2_scaffold_25669_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8704..8931)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFX2_ANASK
Glyoxalase {ECO:0000313|EMBL:KFA92836.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vio
hypothetical protein
Displaying 14 items

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