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13_1_40cm_2_scaffold_29360

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_29360_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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3..443
DNA (441bp) protein (147aa)
panE; 2-dehydropantoate 2-reductase (EC:1.1.1.169) Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
2-dehydropantoate 2-reductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHW3_CORCM
panE; 2-dehydropantoate 2-reductase
13_1_40cm_2_scaffold_29360_2
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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602..5215
DNA (4614bp) protein (1538aa)
Glutamate synthase (Ferredoxin) {ECO:0000313|EMBL:ACG72101.1}; EC=1.4.7.1 {ECO:0000313|EMBL:ACG72101.1};; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacter
glutamate synthase (EC:1.4.7.1)
Glutamate synthase (Ferredoxin) n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEF4_ANASK rbh
13_1_40cm_2_scaffold_29360_3
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5218..6990
DNA (1773bp) protein (591aa)
Glutamate synthase, NADH/NADPH, small subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8M0_ANADF rbh
glutamate synthase NADH/NADPH small subunit
Glutamate synthase, NADH/NADPH, small subunit {ECO:0000313|EMBL:ABS25066.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
13_1_40cm_2_scaffold_29360_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7846..8124)
DNA (279bp) protein (93aa)
Molybdopterin synthase subunit MoaD n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK10_ANADE
ThiS family protein {ECO:0000313|EMBL:GAO02654.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
sulfur transfer protein ThiS
13_1_40cm_2_scaffold_29360_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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8187..9242
DNA (1056bp) protein (352aa)
phospho-2-dehydro-3-deoxyheptonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] Tax=GWA2_Rokubacteria_73_35_curated
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF1_RUBXD
13_1_40cm_2_scaffold_29360_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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9255..9479
DNA (225bp) protein (75aa)
Zinc finger, CDGSH-type id=14625183 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
Zinc finger, CDGSH-type Tax=CSP1_6_Rokubacteria
Zinc finger, CDGSH-type
13_1_40cm_2_scaffold_29360_7
unknown

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comp(9517..9912)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_2_scaffold_29360_8
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10050..10376
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AGQ9_COLFT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY41946.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
13_1_40cm_2_scaffold_29360_9
unknown

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10373..10792
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_40cm_2_scaffold_29360_10
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10854..11393
DNA (540bp) protein (180aa)
RNA polymerase sigma factor n=1 Tax=Burkholderia graminis C4D1M RepID=B1FYP4_9BURK
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia
RNA polymerase sigma factor
13_1_40cm_2_scaffold_29360_11
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11390..12130
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0GBP2_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL78179.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
13_1_40cm_2_scaffold_29360_12
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12724..13869)
DNA (1146bp) protein (382aa)
Response regulator/sensor histidine kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1V8_CORCM
bphP8; response regulator/sensor histidine kinase
Response regulator/sensor histidine kinase {ECO:0000313|EMBL:AFE08235.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Coralloco
13_1_40cm_2_scaffold_29360_13
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13854..14072)
DNA (219bp) protein (73aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0002E49E78
multi-sensor hybrid histidine kinase Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
13_1_40cm_2_scaffold_29360_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14072..14767)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FB47_SORC5
Hybrid signal transduction histidine kinase J Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
hypothetical protein
13_1_40cm_2_scaffold_29360_15
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14778..15938)
DNA (1161bp) protein (387aa)
UPI0003D03753 related cluster n=1 Tax=unknown RepID=UPI0003D03753
Uncharacterized protein {ECO:0000313|EMBL:ESY93079.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp.
Sensor protein
Displaying 15 items

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