ggKbase home page

13_1_40cm_2_scaffold_2968

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2968_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..138
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCU6_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC81266.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_2968_2
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

406..2394
DNA (1989bp) protein (663aa)
two-component hybrid sensor and regulator (EC:2.7.3.-)
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:CAN90870.1}; EC=2.7.3.- {ECO:0000313|EMBL:CAN90870.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; S
Two-component hybrid sensor and regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9ENK6_SORC5
13_1_40cm_2_scaffold_2968_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2391..2798
DNA (408bp) protein (136aa)
Integrase family protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J6Z7_ANAD2
integrase family protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
integrase family protein
13_1_40cm_2_scaffold_2968_trna_1
unknown

Not on your lists

comp(2737..2809)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_2968_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2875..3753
DNA (879bp) protein (293aa)
Peptidase U61 LD-carboxypeptidase A n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J5X7_ANAD2
Putative carboxypeptidase {ECO:0000313|EMBL:GAO03183.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
peptidase U61 LD-carboxypeptidase A
13_1_40cm_2_scaffold_2968_5
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3770..5176
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFZ6_ANADF rbh
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
UDP-N-acetylmuramate {ECO:0000313|EMBL:ABS27642.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" sour
13_1_40cm_2_scaffold_2968_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5173..5964
DNA (792bp) protein (264aa)
inositol-1(or 4)-monophosphatase (EC:3.1.3.25)
Inositol-1(Or 4)-monophosphatase {ECO:0000313|EMBL:ABC83154.1}; EC=3.1.3.25 {ECO:0000313|EMBL:ABC83154.1};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobact
Inositol-1(Or 4)-monophosphatase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEZ5_ANADE
13_1_40cm_2_scaffold_2968_7
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5948..6481)
DNA (534bp) protein (178aa)
Peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family n=2 Tax=Bacteria RepID=B5EC51_GEOBB
OmpA family outer membrane lipoprotein
Peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family {ECO:0000313|EMBL:ACH40507.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae
13_1_40cm_2_scaffold_2968_8
Rathayibacter toxicus, Rathayibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6651..6929)
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003040B5A
membrane protein
Strain 70137, complete genome {ECO:0000313|EMBL:AJM78130.1}; TaxID=145458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Rathayibacter.;" source="Rathayibacter toxicus.;"
13_1_40cm_2_scaffold_2968_9
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

comp(6980..7513)
DNA (534bp) protein (178aa)
putative undecaprenyl-diphosphatase (EC:3.6.1.27)
Membrane-associated phospholipid phosphatase id=4918038 bin=GWA2_Elusimicrobia_66_18 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Membrane-associated phospholipid phosphatase Tax=RBG_16_Elusimicrobia_66_12_curated
13_1_40cm_2_scaffold_2968_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7639..7917
DNA (279bp) protein (93aa)
Probable Fe(2+)-trafficking protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=FETP_ANADF
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_2968_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7921..9228
DNA (1308bp) protein (436aa)
Radical SAM n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKN0_ANADE
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
radical SAM family protein
13_1_40cm_2_scaffold_2968_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9265..10524)
DNA (1260bp) protein (420aa)
Biotin carboxylase-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKM8_ANADE
biotin carboxylase-like
Biotin carboxylase-like protein {ECO:0000313|EMBL:ABC82210.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
13_1_40cm_2_scaffold_2968_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10612..11907
DNA (1296bp) protein (432aa)
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFT7_ANADF rbh
sigma-54 dependent trancsriptional regulator
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS27583.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacteri
13_1_40cm_2_scaffold_2968_14
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11908..13779)
DNA (1872bp) protein (624aa)
arginine decarboxylase (EC:4.1.1.19)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxI
Biosynthetic arginine decarboxylase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJ37_ANADE rbh
Displaying 15 items

View Taxonomy