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13_1_40cm_2_scaffold_3741

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3741_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
glycine cleavage system protein H n=1 Tax=Segetibacter koreensis RepID=UPI00036132F3
glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
13_1_40cm_2_scaffold_3741_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(110..874)
DNA (765bp) protein (255aa)
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
13_1_40cm_2_scaffold_3741_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(871..1956)
DNA (1086bp) protein (362aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FGW2_STIAD rbh
13_1_40cm_2_scaffold_3741_4
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2249..2776
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MK83_CORCM
multi-sensor hybrid histidine kinase Tax=RifOxyA12_full_Proteobacteria_58_15_curated
hypothetical protein
13_1_40cm_2_scaffold_3741_5
unknown

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3204..3797
DNA (594bp) protein (198aa)

This feature has no annotations

13_1_40cm_2_scaffold_3741_6
RBG_13_Chloroflexi_57_8_curated, Chloroflexi, Bacteria

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comp(3691..4725)
DNA (1035bp) protein (345aa)
thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_13_Chloroflexi_57_8_curated
Threonine synthase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0Y5_DEHLB
threonine synthase
13_1_40cm_2_scaffold_3741_7

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comp(4722..6008)
DNA (1287bp) protein (429aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
deb:DehaBAV1_1016 homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=1241401 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
homoserine dehydrogenase (EC:1.1.1.3)
13_1_40cm_2_scaffold_3741_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6083..6523
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LG78_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL16071.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
13_1_40cm_2_scaffold_3741_9
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6520..7623
DNA (1104bp) protein (368aa)
Class I/II aminotransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U1G1_MYXSD rbh
Aspartate aminotransferase {ECO:0000313|EMBL:AKF79916.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myx
class I/II aminotransferase
13_1_40cm_2_scaffold_3741_10
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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7688..8080
DNA (393bp) protein (131aa)
Ferric uptake regulator, Fur family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L318_THERP
ferric uptake regulator, Fur family
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACM06629.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum
13_1_40cm_2_scaffold_3741_11
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8077..9612
DNA (1536bp) protein (512aa)
Transporter {ECO:0000313|EMBL:AKF11420.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylol
13_1_40cm_2_scaffold_3741_12
unknown

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9647..9919
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_2_scaffold_3741_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(9906..10565)
DNA (660bp) protein (220aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Caulobacter sp. (strain K31) RepID=RPIA_CAUSK
Ribose-5-phosphate isomerase A
13_1_40cm_2_scaffold_3741_14
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10575..11858)
DNA (1284bp) protein (428aa)
Chromate transporter, chromate ion transporter (CHR) family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB63_ANASK rbh
chromate transporter
Chromate transporter, chromate ion transporter (CHR) family {ECO:0000313|EMBL:ACG71711.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromy
13_1_40cm_2_scaffold_3741_15
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11885..14911
DNA (3027bp) protein (1009aa)
Type III restriction enzyme, res subunit family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08VX8_STIAD rbh
ATP-dependent RNA helicase
ATP-dependent RNA helicase {ECO:0000313|EMBL:ADO75306.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="
Displaying 15 items

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