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13_1_40cm_2_scaffold_8791

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8791_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1..636)
DNA (636bp) protein (212aa)
Peptidase M24 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X6_9BACT
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:CBK40035.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_2_scaffold_8791_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(660..1355)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JBE9_ANAD2
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_8791_3
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1357..2931)
DNA (1575bp) protein (525aa)
Amidohydrolase 3 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UC47_ANASK rbh
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:ACG73278.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="
13_1_40cm_2_scaffold_8791_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2962..3678
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7U6_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC44193.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_2_scaffold_8791_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3690..4448
DNA (759bp) protein (253aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09AB3_STIAD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_8791_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4421..4726)
DNA (306bp) protein (102aa)
Metallo-beta-lactamase family protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBW2_MYXFH
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:AEI65928.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" s
13_1_40cm_2_scaffold_8791_7
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(5024..6604)
DNA (1581bp) protein (527aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
13_1_40cm_2_scaffold_8791_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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6698..6943
DNA (246bp) protein (82aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1
Signal transduction histidine kinase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VR60_9GAMM
cheY; Signal transduction histidine kinase
13_1_40cm_2_scaffold_8791_9
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7065..9137)
DNA (2073bp) protein (691aa)
Topoisomerase IV subunit B protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S011_9DELT rbh
type II DNA topoisomerase subunit B
Topoisomerase IV subunit B protein {ECO:0000313|EMBL:ERK88846.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" sou
13_1_40cm_2_scaffold_8791_10
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9138..11477)
DNA (2340bp) protein (780aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
Type II DNA topoisomerase, A subunit n=3 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FVB7_STIAD rbh
type II DNA topoisomerase subunit A
13_1_40cm_2_scaffold_8791_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11795..13873)
DNA (2079bp) protein (693aa)
Small GTP-binding protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHQ9_ANASK rbh
elongation factor G domain-containing protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
small GTP-binding protein
13_1_40cm_2_scaffold_8791_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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13945..16440
DNA (2496bp) protein (832aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2)
Signal peptide peptidase SppA, 36K type n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JGE0_ANAD2 rbh
Protease 4 {ECO:0000313|EMBL:GAO03312.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobact
13_1_40cm_2_scaffold_8791_13
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16441..18333
DNA (1893bp) protein (631aa)
Heat shock protein DnaJ domain protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9T8_ANAD2
PT repeat/DnaJ domain/TPR repeat-containing protein Tax=RifOxyA12_full_Proteobacteria_58_15_curated
heat shock protein DnaJ domain-containing protein
13_1_40cm_2_scaffold_8791_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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18350..19918
DNA (1569bp) protein (523aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=404589 specie
Transcription termination factor Rho n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H9J7_ANADF
transcription termination factor Rho
13_1_40cm_2_scaffold_8791_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20006..21970)
DNA (1965bp) protein (655aa)
Peptidase S9, prolyl oligopeptidase active site region n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRS8_CORCM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE68174.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
yuxL2; peptidase S9, prolyl oligopeptidase active site region
13_1_40cm_2_scaffold_8791_16
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22031..22327)
DNA (297bp) protein (99aa)
Coiled coil domain-containing protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6H5_9DELT
Coiled coil domain-containing protein {ECO:0000313|EMBL:EMS80367.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" sourc
hypothetical protein
13_1_40cm_2_scaffold_8791_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22398..23132)
DNA (735bp) protein (245aa)
phosphopantethiene-protein transferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B4553
4'-phosphopantetheinyl transferase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
phosphopantetheinyl transferase
13_1_40cm_2_scaffold_8791_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23138..23989)
DNA (852bp) protein (284aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFM5_STIAD
tRNA pseudouridine synthase b
Displaying 18 items

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