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13_1_40cm_2_scaffold_11012

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11012_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2..1075
DNA (1074bp) protein (358aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein id=5011106 bin=GWA2_Methylomirabilis_73_35 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tricarballylate dehydrogenase Tax=GWA2_Rokubacteria_73_35_curated
tricarballylate dehydrogenase
13_1_40cm_2_scaffold_11012_2
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1114..1674
DNA (561bp) protein (187aa)
Oxidoreductase, 2OG-Fe(II) oxygenase family n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FFS6_STIAD
2og-fe(II) oxygenase family oxidoreductase
Oxidoreductase, 2OG-Fe(II) oxygenase family family {ECO:0000313|EMBL:EAU69141.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae;
13_1_40cm_2_scaffold_11012_3
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(1675..2076)
DNA (402bp) protein (134aa)
Roadblock/LC7 family protein {ECO:0000313|EMBL:AEH06396.1}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermoc
13_1_40cm_2_scaffold_11012_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2076..2819)
DNA (744bp) protein (248aa)
Probable TPR-domain containing protein id=4362538 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_11012_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3130..3492
DNA (363bp) protein (121aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=K9ZXC3_DEIPD
putative chemotaxis regulator CheY; K02658 twitching motility two-component system response regulator PilH Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
13_1_40cm_2_scaffold_11012_6
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3489..3968
DNA (480bp) protein (160aa)
Chemotaxis signal transduction protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67P73_SYMTH
cheW2; chemotaxis signal transduction protein
Chemotaxis signal transduction protein {ECO:0000313|EMBL:BAD40520.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacter
13_1_40cm_2_scaffold_11012_7
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3970..5289
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YJP1_THEYD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI21984.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (stra
13_1_40cm_2_scaffold_11012_8
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5286..7085
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000368576A rbh
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AFZ65851.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus pe
13_1_40cm_2_scaffold_11012_9
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7104..7922
DNA (819bp) protein (273aa)
CheR-type MCP methyltransferase (EC:2.1.1.80)
MCP methyltransferase, CheR-type {ECO:0000313|EMBL:ABK51997.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ABK51997.1};; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermu
MCP methyltransferase, CheR-type n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LRD7_ACIC1
13_1_40cm_2_scaffold_11012_10
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7919..9370
DNA (1452bp) protein (484aa)
CheA signal transduction histidine kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG21_MEISD
Strain A contig00032, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ54660.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiotherm
CheA signal transduction histidine kinase
13_1_40cm_2_scaffold_11012_11
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

9322..10617
DNA (1296bp) protein (432aa)
CheA signal transduction histidine kinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BG21_MEISD
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ADH63724.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silv
13_1_40cm_2_scaffold_11012_12
unknown

Not on your lists

comp(11305..11427)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_2_scaffold_11012_13
unknown

Not on your lists

11635..12093
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_11012_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12090..12476
DNA (387bp) protein (129aa)
Positive regulator of CheA protein activity (CheW) n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QCU5_9DELT
chemotaxis protein CheW; K03408 purine-binding chemotaxis protein CheW Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
frizzy aggregation protein A
13_1_40cm_2_scaffold_11012_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

12454..13236
DNA (783bp) protein (261aa)
response regulator receiver protein id=14428717 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
response regulator receiver protein Tax=CSP1_5_NC10
response regulator receiver protein
13_1_40cm_2_scaffold_11012_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13249..14187
DNA (939bp) protein (313aa)
UPI000347886C related cluster n=1 Tax=unknown RepID=UPI000347886C
putative response regulator Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
response regulator receiver protein
13_1_40cm_2_scaffold_11012_17
unknown

Not on your lists

15836..16636
DNA (801bp) protein (267aa)

This feature has no annotations

13_1_40cm_2_scaffold_11012_18
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

16647..17255
DNA (609bp) protein (203aa)
MglA protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DTW3_9BACT
MglA protein {ECO:0000313|EMBL:EDM24932.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HTCC2155.;"
gliding motility protein
13_1_40cm_2_scaffold_11012_19
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

17252..17740
DNA (489bp) protein (163aa)
MglB protein n=2 Tax=Dictyoglomus RepID=B5YEW3_DICT6
Roadblock/LC7 family protein Tax=RBG_16_Zixibacteria_43_9_curated
MglB protein
13_1_40cm_2_scaffold_11012_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17747..18700
DNA (954bp) protein (318aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type II secretion system protein E id=4311467 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type IV-A pilus assembly ATPase PilB
Displaying 20 items

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