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13_1_40cm_2_scaffold_1031

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1031_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)
ccmE; cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_40cm_2_scaffold_1031_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(103..300)
DNA (198bp) protein (66aa)
id=4796929 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
id=4796929 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_1031_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(300..956)
DNA (657bp) protein (219aa)
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) id=4343481 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) Tax=GWA2_Rokubacteria_73_35_curated
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
13_1_40cm_2_scaffold_1031_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(953..1630)
DNA (678bp) protein (226aa)
Cytochrome c-type biogenesis protein CcmB id=4343483 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heme exporter, protein B Tax=GWA2_Rokubacteria_73_35_curated
ccmB; heme exporter protein CcmB
13_1_40cm_2_scaffold_1031_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1627..2346)
DNA (720bp) protein (240aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4343485 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_1031_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2386..3273)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003638EF1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
13_1_40cm_2_scaffold_1031_7
unknown

Not on your lists

comp(3346..3450)
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_1031_8
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3461..3655)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QHY2_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW90664.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
13_1_40cm_2_scaffold_1031_9
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3636..3806)
DNA (171bp) protein (57aa)
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_40cm_2_scaffold_1031_10
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3819..5474)
DNA (1656bp) protein (552aa)
Peptidase S41 n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QRF5_RALPI
Cytochrome C oxidase {ECO:0000313|EMBL:EYS86809.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;
peptidase S41
13_1_40cm_2_scaffold_1031_11
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5491..6882)
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QN15_RALPI
Cytochrome oxidase {ECO:0000313|EMBL:EYS86810.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
13_1_40cm_2_scaffold_1031_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6929..7795)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEB0_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27056.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_1031_13
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7814..8275)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEA9_ANADF
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
hypothetical protein
13_1_40cm_2_scaffold_1031_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8314..9537)
DNA (1224bp) protein (408aa)
Metallophosphoesterase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG40_9BACT rbh
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:CBE68721.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_1031_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9590..10315)
DNA (726bp) protein (242aa)
Putative lipoprotein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG39_9BACT
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CBE68720.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_1031_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10350..11171)
DNA (822bp) protein (274aa)
putative transmembrane regulator PrtR
transmembrane transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transmembrane transcriptional regulator id=14626590 bin=bin7_NC10_sister species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_1031_17
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11158..11733)
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P074_GRAMM
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEU36868.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella
13_1_40cm_2_scaffold_1031_18
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11978..12310)
DNA (333bp) protein (111aa)
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] id=14625131 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
endopeptidase htpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=CSP1_6_Rokubacteria
endopeptidase htpX (EC:3.4.24.-)
Displaying 18 items

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