ggKbase home page

13_1_40cm_2_scaffold_14544

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14544_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_14544_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

259..1110
DNA (852bp) protein (284aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Probable sugar ABC transporter, permease protein id=3709050 bin=GWC2_Methylomirabilis_70_24 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
sugar ABC transporter permease
13_1_40cm_2_scaffold_14544_3
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

1122..1790
DNA (669bp) protein (223aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
glycerol-3-phosphate ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_14544_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1787..2161
DNA (375bp) protein (125aa)
Putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter id=2930701 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerol-3-phosphate ABC transporter ATP-binding protein; K10112 maltose/maltodextrin transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
glycerol-3-phosphate ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_14544_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

2161..3153
DNA (993bp) protein (331aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Putative uncharacterized protein id=3842142 bin=GWF2_Methylomirabilis_70_14 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_14544_6
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3150..4022
DNA (873bp) protein (291aa)
Binding-protein-dependent transport system inner membrane component n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LEW5_9ACTO
Sugar ABC transporter permease {ECO:0000313|EMBL:KJC51139.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizo
ABC transporter permease
13_1_40cm_2_scaffold_14544_7
unknown

Not on your lists

comp(4025..5095)
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_40cm_2_scaffold_14544_8
unknown

Not on your lists

comp(5092..5541)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_2_scaffold_14544_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5679..6536)
DNA (858bp) protein (286aa)
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein id=14430377 bin=bin3_NC10 species=Nitrobacter hamburgensis genus=Nitrobacter taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=CSP1_5_NC10
Binding-protein-dependent transport systems inner membrane component
13_1_40cm_2_scaffold_14544_10
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6544..7311)
DNA (768bp) protein (256aa)
ABC transport system permease protein y4oQ n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ETE9_CUPNN
ABC transporter permease
ABC transport system permease protein y4oQ {ECO:0000313|EMBL:AEI75620.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source=
13_1_40cm_2_scaffold_14544_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7476..8810)
DNA (1335bp) protein (445aa)
Extracellular solute-binding protein family 1 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HAW9_ANADF
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ABS25865.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae;
13_1_40cm_2_scaffold_14544_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8887..9342)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037888C4
hypothetical protein; K06934 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_2_scaffold_14544_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9426..9806
DNA (381bp) protein (127aa)
id=3020265 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3020265 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_14544_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9810..10088)
DNA (279bp) protein (93aa)
id=3742536 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3742536 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_14544_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10158..10559)
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=3020266 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_14544_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10718..11620
DNA (903bp) protein (301aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase id=3020269 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Verminephrobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase
13_1_40cm_2_scaffold_14544_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

11710..12255
DNA (546bp) protein (182aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (aPGAM) (EC:5.4.2.1)
Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) (BPG-independent PGAM) (APGAM) id=3020272 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 17 items

View Taxonomy