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13_1_40cm_2_scaffold_14583

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14583_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1..678
DNA (678bp) protein (226aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5) Tax=GWA2_Rokubacteria_73_35_curated
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp synthetase I) ((P)ppGpp synthetase) id=2537527 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_14583_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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710..1084
DNA (375bp) protein (125aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4319695 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_14583_3
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1153..1539
DNA (387bp) protein (129aa)
ferritin n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B5E026
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC21774.1}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
13_1_40cm_2_scaffold_14583_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1536..2342
DNA (807bp) protein (269aa)
bacteriocin n=1 Tax=Humibacter albus RepID=UPI0003B40ADC
Photosynthetic reaction center L subunit {ECO:0000313|EMBL:ERF83592.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="
Linocin_M18 bacteriocin protein
13_1_40cm_2_scaffold_14583_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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2497..3546
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein id=14627009 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_14583_6
unknown

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comp(3418..3774)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_14583_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3803..3994)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 id=3362966 bin=GWA2_Methylomirabilis_73_35 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
50S ribosomal protein L28
13_1_40cm_2_scaffold_14583_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4060..4659
DNA (600bp) protein (200aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=GWA2_Rokubacteria_73_35_curated
ATP-dependent DNA helicase RecG id=3362965 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATP-dependent DNA helicase RecG
13_1_40cm_2_scaffold_14583_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4625..6112
DNA (1488bp) protein (496aa)
recG; ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATP-dependent DNA helicase RecG id=3362965 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATP-dependent DNA helicase RecG
13_1_40cm_2_scaffold_14583_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6318..6812
DNA (495bp) protein (165aa)
Methyltransferase id=3362964 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methyltransferase Tax=GWA2_Rokubacteria_73_35_curated
putative methyltransferase
13_1_40cm_2_scaffold_14583_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

6814..7311
DNA (498bp) protein (166aa)
pantetheine-phosphate adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Phosphopantetheine adenylyltransferase id=3362963 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphopantetheine adenylyltransferase
13_1_40cm_2_scaffold_14583_12
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

7329..8534
DNA (1206bp) protein (402aa)
aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase A (AspAT) id=4834180 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_14583_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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8531..9475
DNA (945bp) protein (315aa)
GTPase or GTP-binding protein; K06947 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
GTPase or GTP-binding protein; K06947 id=14627508 bin=bin7_NC10_sister species=Methanopyrus kandleri genus=Methanopyrus taxon_order=Methanopyrales taxon_class=Methanopyri phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
GTPase or GTP-binding protein-like protein
Displaying 13 items

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