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13_1_40cm_2_scaffold_14915

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14915_1
R_NC10_66_22, NC10, Bacteria

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comp(3..446)
DNA (444bp) protein (148aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CRW8_TRURR
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_14915_2
R_NC10_66_22, NC10, Bacteria

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comp(443..673)
DNA (231bp) protein (77aa)
Permease component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF080 RepID=J2JVB3_9RHIZ
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Binding--dependent transport system inner membrane component family protein
13_1_40cm_2_scaffold_14915_3
R_NC10_66_22, NC10, Bacteria

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comp(1287..2606)
DNA (1320bp) protein (440aa)
Bll2731 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RN2_BRADU
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_14915_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2933..3217
DNA (285bp) protein (95aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4202596 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_14915_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3243..4400)
DNA (1158bp) protein (386aa)
Amidohydrolase 3 id=2995730 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative amidohydrolase Tax=GWA2_Rokubacteria_70_23_curated
dihydroorotase
13_1_40cm_2_scaffold_14915_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4403..5308)
DNA (906bp) protein (302aa)
Phytanoyl-CoA dioxygenase family protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFE0_STRRD
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EWY38710.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella s
phytanoyl-CoA dioxygenase family protein
13_1_40cm_2_scaffold_14915_7
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5322..5642)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YUN6_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT08941.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminoph
13_1_40cm_2_scaffold_14915_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5682..6440)
DNA (759bp) protein (253aa)
Short-chain dehydrogenase {ECO:0000313|EMBL:ETW93334.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Short-chain dehydrogenase/reductase SDR id=3741753 bin=GWC2_Methylomirabilis_70_16 species=Azoarcus sp. KH32C genus=Azoarcus taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_14915_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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6535..7674
DNA (1140bp) protein (380aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WEB0_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETW93490.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
TIM-barrel fold metal-dependent hydrolase
13_1_40cm_2_scaffold_14915_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7678..9033
DNA (1356bp) protein (452aa)
Adenylosuccinate lyase n=1 Tax=Rhodococcus opacus M213 RepID=K8XZ32_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:ETW94146.1}; Flags: Fragment;; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
Adenylosuccinate lyase
13_1_40cm_2_scaffold_14915_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9046..9441)
DNA (396bp) protein (132aa)
translation initiation inhibitor n=1 Tax=Bradyrhizobium japonicum RepID=UPI000379227C
hypothetical protein; K07567 TdcF protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_40cm_2_scaffold_14915_12
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9503..10183
DNA (681bp) protein (227aa)
Regulatory protein ArsR n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IU11_FRASU
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADP81204.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
13_1_40cm_2_scaffold_14915_13
Mycobacterium vulneris, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10128..11108)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037F5956
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDO31206.1}; TaxID=547163 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium aviu
putative amidohydrolase
13_1_40cm_2_scaffold_14915_14
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11111..11209)
DNA (99bp) protein (33aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EJW13582.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source=
Displaying 14 items

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