ggKbase home page

13_1_40cm_2_scaffold_15146

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15146_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..801)
DNA (801bp) protein (267aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] id=14627445 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
threonine aldolase
13_1_40cm_2_scaffold_15146_2
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(824..1576)
DNA (753bp) protein (251aa)
tetratricopeptide TPR_2 repeat protein; K05807 putative lipoprotein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein; K05807 putative lipoprotein id=14627446 bin=bin7_NC10_sister species=Thalassiobium sp. R2A62 genus=Thalassobium taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative lipoprotein
13_1_40cm_2_scaffold_15146_3
unknown

Not on your lists

comp(1625..2449)
DNA (825bp) protein (275aa)

This feature has no annotations

13_1_40cm_2_scaffold_15146_4
unknown

Not on your lists

comp(2512..2721)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_15146_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

3002..3859
DNA (858bp) protein (286aa)
alcohol dehydrogenase GroES-like protein id=14627896 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase GroES-like protein Tax=CSP1_6_Rokubacteria
alcohol dehydrogenase GroES-like protein
13_1_40cm_2_scaffold_15146_6
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3937..5718
DNA (1782bp) protein (594aa)
glycosyl hydrolase n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002379AC6
Glycosyl hydrolase {ECO:0000313|EMBL:EWT05418.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
glycosyl hydrolase
13_1_40cm_2_scaffold_15146_7
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5715..6197
DNA (483bp) protein (161aa)
Predicted protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=D6XA12_STRPR
Predicted protein {ECO:0000313|EMBL:EFH30894.1}; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.
hypothetical protein
13_1_40cm_2_scaffold_15146_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6190..6780)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNM8_9PROT
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
13_1_40cm_2_scaffold_15146_9
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6933..9524)
DNA (2592bp) protein (864aa)
Abc transporter n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9VYG8_9CYAN
Abc transporter {ECO:0000313|EMBL:ESA35818.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. Heron Island J.;"
ABC transporter-like protein
13_1_40cm_2_scaffold_15146_10
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9526..10395)
DNA (870bp) protein (290aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FJY1_9CYAN rbh
Amino acid/amide ABC transporter membrane protein 1, HAAT family {ECO:0000313|EMBL:EKV03168.1}; Flags: Precursor;; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales
inner-membrane translocator
13_1_40cm_2_scaffold_15146_11
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(10447..11367)
DNA (921bp) protein (307aa)
Receptor family ligand binding region n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WTM4_9SYNE
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1 Tax=RBG_16_NC10_65_8_curated
ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_15146_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11677..12174)
DNA (498bp) protein (166aa)
N-acetyltransferase GCN5; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183] Tax=GWA2_Rokubacteria_73_35_curated
Transcriptional regulator, ArsR family id=4213638 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_15146_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12171..12380)
DNA (210bp) protein (70aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NAD-dependent epimerase/dehydratase id=4213636 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_15146_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12429..13178
DNA (750bp) protein (250aa)
putative methyltransferase type 11 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase id=4213634 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative methyltransferase type 11
13_1_40cm_2_scaffold_15146_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13213..13707
DNA (495bp) protein (165aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=GWA2_Rokubacteria_73_35_curated
D-3-phosphoglycerate dehydrogenase id=4213632 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-3-phosphoglycerate dehydrogenase
Displaying 15 items

View Taxonomy