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13_1_40cm_2_scaffold_1710

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1710_1
unknown

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1..354
DNA (354bp) protein (118aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(939..1412)
DNA (474bp) protein (158aa)
hypothetical protein id=14627341 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_1710_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1582..2154
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_1710_4
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2179..3165)
DNA (987bp) protein (329aa)
NADPH:quinone reductase (EC:1.6.5.5)
NADPH:quinone reductase n=1 Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VC82_9CYAN rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIF37921.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
13_1_40cm_2_scaffold_1710_5
unknown

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comp(3213..3521)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_6
unknown

Not on your lists

comp(3720..4046)
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_7
unknown

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4258..4548
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4590..4904)
DNA (315bp) protein (105aa)
GAF sensor hybrid histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative Histidine kinase id=4726950 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
histidine kinase
13_1_40cm_2_scaffold_1710_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5114..5608
DNA (495bp) protein (165aa)
Cupin region n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IVF3_RHOP2
cupin region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cupin region
13_1_40cm_2_scaffold_1710_10
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5612..5824)
DNA (213bp) protein (71aa)
Dodecin n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG69_9PROT
Dodecin {ECO:0000313|EMBL:CCU61193.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
13_1_40cm_2_scaffold_1710_11
unknown

Not on your lists

comp(5968..6183)
DNA (216bp) protein (72aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_12
Zea mays, Zea, Poales, commelinids, Streptophyta, Viridiplantae

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comp(6291..7154)
DNA (864bp) protein (288aa)
Lysine-rich arabinogalactan protein 19 n=1 Tax=Arabidopsis thaliana RepID=AGP19_ARATH
Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM5G883759_P01}; TaxID=4577 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida;
Fe-S oxidoreductase
13_1_40cm_2_scaffold_1710_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(7154..8794)
DNA (1641bp) protein (547aa)
General secretion pathway protein A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT1_9BACT
exeA; General secretion pathway protein A
General secretion pathway protein A {ECO:0000313|EMBL:CBE67730.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;
13_1_40cm_2_scaffold_1710_14
unknown

Not on your lists

8932..9180
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9202..10005)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L729_9GAMM
sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative two-component sensor histidine kinase protein
13_1_40cm_2_scaffold_1710_16
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10091..10849)
DNA (759bp) protein (253aa)
short-chain alcohol dehydrogenase Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
Short-chain dehydrogenase id=2247805 bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_2_scaffold_1710_17
unknown

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comp(10881..11006)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_1710_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11083..11340
DNA (258bp) protein (86aa)
putative aldehyde ferredoxin oxidoreductase; K03738 aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] Tax=GWC2_Rokubacteria_70_16_curated
Putative aldehyde ferredoxin oxidoreductase id=5018844 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative aldehyde ferredoxin oxidoreductase
Displaying 18 items

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