ggKbase home page

13_1_40cm_2_scaffold_17394

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_17394_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..787
DNA (786bp) protein (262aa)
thiamine pyrophosphate protein domain-containing protein TPP-binding protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Thiamine pyrophosphate enzyme, C-TPP binding domain-containing protein id=1749075 bin=GWD2_Deltaproteobacteria_55_8 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thiamine pyrophosphate protein domain-containing protein TPP-binding protein
13_1_40cm_2_scaffold_17394_2
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(789..1904)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD
hypothetical protein; K07045 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
amidohydrolase family protein
13_1_40cm_2_scaffold_17394_3
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2122..2433)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD
hypothetical protein; K07045 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
amidohydrolase family protein
13_1_40cm_2_scaffold_17394_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2421..3128)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3S8_9BRAD
hypothetical protein; K07045 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_17394_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3128..3358)
DNA (231bp) protein (77aa)
amidohydrolase 3; K15358 enamidase [EC:3.5.2.18] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cytosine deaminase-like metal-dependent hydrolase id=4814550 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase 3
13_1_40cm_2_scaffold_17394_6
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4227..4901)
DNA (675bp) protein (225aa)
4-hydroxyphenylacetate 3-hydroxylase n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M644_9BACL
4-hydroxyphenylacetate 3-hydroxylase {ECO:0000313|EMBL:EST53787.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihum
4-hydroxyphenylacetate 3-hydroxylase
13_1_40cm_2_scaffold_17394_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5724..6236
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2545784 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_17394_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6233..6784
DNA (552bp) protein (184aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=2545782 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_17394_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6853..7440
DNA (588bp) protein (196aa)
id=2724780 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2724780 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_17394_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7437..8654
DNA (1218bp) protein (406aa)
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Extracellular ligand-binding receptor id=2724781 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
branched-chain amino acid ABC transporter, periplasmic binding protein
13_1_40cm_2_scaffold_17394_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8706..9029
DNA (324bp) protein (108aa)
Inner-membrane translocator n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8R2_AMMDK
Uncharacterized protein {ECO:0000313|EMBL:ETX04959.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
inner-membrane translocator
Displaying 11 items

View Taxonomy