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13_1_40cm_2_scaffold_15961

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15961_1
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(19..807)
DNA (789bp) protein (263aa)
glucose-1-phosphate cytidylyltransferase; K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] Tax=RBG_13_WOR_2_41_10_curated
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33); K00978 glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] id=14429848 bin=bin3_NC10 species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
13_1_40cm_2_scaffold_15961_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(848..1567)
DNA (720bp) protein (240aa)
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) id=1906303 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_15961_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1567..2211)
DNA (645bp) protein (215aa)
type 12 methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Methyltransferase type 12 id=1906302 bin=GWA2_Methylomirabilis_73_35 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type 12 methyltransferase
13_1_40cm_2_scaffold_15961_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2189..3628)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein id=1906301 bin=GWA2_Methylomirabilis_73_35 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_15961_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3645..4118)
DNA (474bp) protein (158aa)
ABC transport system protein id=4288073 bin=GWF2_Methylomirabilis_70_14 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livG; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_15961_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4136..5227)
DNA (1092bp) protein (364aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 id=4288070 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
13_1_40cm_2_scaffold_15961_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5224..6102)
DNA (879bp) protein (293aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Branched-chain amino acid ABC transporter permease protein I id=1906297 bin=GWA2_Methylomirabilis_73_35 species=Haloarcula vallismortis genus=Haloarcula taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
high-affinity branched-chain amino acid transporter membrane protein
13_1_40cm_2_scaffold_15961_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6228..7406)
DNA (1179bp) protein (393aa)
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
branched-chain amino acid ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_15961_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

7521..8705
DNA (1185bp) protein (395aa)
Formyl-CoA transferase (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F id=14625352 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_15961_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8702..9199)
DNA (498bp) protein (166aa)
id=3674960 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative O-methyltransferase id=2479228 bin=GWC2_Methylomirabilis_70_24 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_15961_11
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9486..10280
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002FA4B1D
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
hypothetical protein
13_1_40cm_2_scaffold_15961_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10287..11006
DNA (720bp) protein (240aa)
Putative phosphoesterase, ICC n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WD52_9CYAN
phosphoesterase, ICC
Putative phosphoesterase, ICC {ECO:0000313|EMBL:AFZ18335.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
13_1_40cm_2_scaffold_15961_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10981..11427)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:ABB76061.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira mul
13_1_40cm_2_scaffold_15961_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(11448..12212)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YI1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85284.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_15961_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12337..13131
DNA (795bp) protein (265aa)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) {ECO:0000313|EMBL:CCE08769.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCE08769.1};; TaxID=551947 species="Bacteria; Prote
livG; high-affinity branched-chain amino acid transport protein (EC:3.6.3.-)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP-binding) n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TQN1_9BRAD
13_1_40cm_2_scaffold_15961_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13131..13841
DNA (711bp) protein (237aa)
livF; high-affinity branched-chain amino acid ABC transporter ATP binding protein (EC:3.6.3.-); K01996 branched-chain amino acid transport system ATP-binding protein Tax=RBG_16_Betaproteobacteria_66_2
ABC transporter related protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJV8_9PROT
ABC transporter-like protein
13_1_40cm_2_scaffold_15961_17
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13842..14045
DNA (204bp) protein (68aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Variovorax sp. CF313 RepID=J2K0S8_9BURK
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
inner-membrane translocator
Displaying 17 items

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