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13_1_40cm_2_scaffold_21394

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_21394_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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132..2213
DNA (2082bp) protein (694aa)
guanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative transmembrane sensor domain protein id=2227968 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
putative transmembrane sensor domain protein
13_1_40cm_2_scaffold_21394_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2256..2927
DNA (672bp) protein (224aa)
methyltransferase cognate corrinoid protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
methyltransferase cognate corrinoid protein id=14625094 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
13_1_40cm_2_scaffold_21394_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2852..3796)
DNA (945bp) protein (315aa)
Uncharacterized protein {ECO:0000313|EMBL:KIJ71387.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
13_1_40cm_2_scaffold_21394_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4043..4663
DNA (621bp) protein (207aa)
Vitamin B12 dependent methionine synthase activation region Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Vitamin B12 dependent methionine synthase id=4780179 bin=GWA2_Methylomirabilis_73_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_21394_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

4718..5446
DNA (729bp) protein (243aa)
echA8_3; enoyl-CoA dehydratase EchA8_3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Enoyl-CoA dehydratase EchA8_3 id=4547814 bin=GWC2_Methylomirabilis_70_24 species=Mycobacterium sp. genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good rbh
echA8_3; enoyl-CoA dehydratase EchA8_3
13_1_40cm_2_scaffold_21394_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5443..6633
DNA (1191bp) protein (397aa)
protein C7orf10 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4712288 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein C7orf10
13_1_40cm_2_scaffold_21394_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6630..7280
DNA (651bp) protein (217aa)
Putative uncharacterized protein id=3132984 bin=GWF2_Methylomirabilis_70_14 species=Geitlerinema sp. PCC 7407 genus=Geitlerinema taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
hypothetical protein
13_1_40cm_2_scaffold_21394_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7333..7857
DNA (525bp) protein (175aa)
shikimate dehydrogenase (EC:1.1.1.25) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Shikimate kinase id=4780140 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aroK; shikimate kinase
13_1_40cm_2_scaffold_21394_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7841..9691
DNA (1851bp) protein (617aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=GWA2_Rokubacteria_70_23_curated
Methylenetetrahydrofolate reductase id=4884112 bin=GWC2_Methylomirabilis_70_24 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
13_1_40cm_2_scaffold_21394_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9678..10943
DNA (1266bp) protein (422aa)
Amidase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidase id=5037265 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Amidase
13_1_40cm_2_scaffold_21394_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10943..12550
DNA (1608bp) protein (536aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] id=14625087 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
13_1_40cm_2_scaffold_21394_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12812..13159
DNA (348bp) protein (116aa)
Transcriptional regulatory protein GlrR Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=14625083 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_21394_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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13310..13684
DNA (375bp) protein (125aa)
RNP-1 like RNA-binding protein id=3708973 bin=GWA2_Methylomirabilis_73_35 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative RNA-binding protein RbpA Tax=GWA2_Rokubacteria_73_35_curated
putative RNA-binding protein RbpA
13_1_40cm_2_scaffold_21394_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(13764..15287)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=3708972 bin=GWA2_Methylomirabilis_73_35 species=Bacillus sp. 2_A_57_CT2 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Uroporphyrinogen decarboxylase (URO-D)
Displaying 14 items

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