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13_1_40cm_2_scaffold_22033

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_22033_1
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..485)
DNA (483bp) protein (161aa)
phosphoglycolate phosphatase n=1 Tax=Rhizobium meliloti RepID=UPI0002F34125
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:CDX34920.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
13_1_40cm_2_scaffold_22033_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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649..1101
DNA (453bp) protein (151aa)
RlpA-like lipoprotein id=2336348 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
rare lipoprotein A
13_1_40cm_2_scaffold_22033_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1107..2174)
DNA (1068bp) protein (356aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=1884755 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase
13_1_40cm_2_scaffold_22033_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2218..2808
DNA (591bp) protein (197aa)
membrane-associated protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SNARE associated Golgi protein-like protein id=2913053 bin=GWC2_Methylomirabilis_70_16 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DedA protein family
13_1_40cm_2_scaffold_22033_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2909..4204
DNA (1296bp) protein (432aa)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Integral membrane sensor signal transduction histidine kinase id=1884757 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_22033_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4197..5585
DNA (1389bp) protein (463aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=1884909 bin=GWA2_Methylomirabilis_73_35 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sigma-54 dependent DNA-binding response regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=GWA2_Rokubacteria_73_35_curated
sigma-54 dependent DNA-binding response regulator
13_1_40cm_2_scaffold_22033_7
unknown

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comp(5607..5909)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_2_scaffold_22033_8
CSP1_5_NC10, NC10, Bacteria

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comp(5919..6131)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035D437E
putative outer membrane protein Tax=CSP1_5_NC10
outer membrane protein
13_1_40cm_2_scaffold_22033_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6532..9300
DNA (2769bp) protein (923aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PAS/PAC sensor hybrid histidine kinase id=4942499 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_22033_10
R_NC10_66_22, NC10, Bacteria

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comp(9302..9760)
DNA (459bp) protein (153aa)
intradiol ring-cleavage dioxygenase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
13_1_40cm_2_scaffold_22033_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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9781..10959
DNA (1179bp) protein (393aa)
Glycogen synthase id=1884913 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycogen synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RfaG2; glycosyltransferase
Displaying 11 items

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