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13_1_40cm_2_scaffold_2331

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2331_1
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(46..369)
DNA (324bp) protein (108aa)
rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.
Sulfurtransferase id=4760758 bin=GWC2_Pelobacter_58_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_2331_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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983..1171
DNA (189bp) protein (63aa)
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_2331_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1234..2364
DNA (1131bp) protein (377aa)
citrate synthase (EC:2.3.3.1); K01647 citrate synthase [EC:2.3.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
citrate synthase (EC:2.3.3.1)
Citrate synthase id=3963832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2331_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2468..4384
DNA (1917bp) protein (639aa)
acnA; aconitate hydratase (EC:4.2.1.3) Tax=GWA2_Rokubacteria_73_35_curated
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase id=3841313 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2331_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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4381..5487
DNA (1107bp) protein (369aa)
PrpF family protein; K09788 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
AcnD-accessory protein PrpF id=3841322 bin=GWF2_Methylomirabilis_70_14 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PrpF family protein
13_1_40cm_2_scaffold_2331_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5484..6035
DNA (552bp) protein (184aa)
id=14627426 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=3296245 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_2331_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6032..7441
DNA (1410bp) protein (470aa)
acyltransferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Phospholipid/glycerol acyltransferase id=3963827 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_2331_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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7438..8355
DNA (918bp) protein (306aa)
creatininase family protein; K01470 creatinine amidohydrolase [EC:3.5.2.10] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Creatininase family protein id=3963826 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
creatininase family protein
13_1_40cm_2_scaffold_2331_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8352..9098
DNA (747bp) protein (249aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
3-hydroxybutyryl-CoA dehydratase id=3963825 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2331_10
unknown

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comp(9106..9537)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_2_scaffold_2331_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9615..11837)
DNA (2223bp) protein (741aa)
Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UA81_METS4
putative phytochrome sensor protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative phytochrome sensor protein
13_1_40cm_2_scaffold_2331_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

11963..12307
DNA (345bp) protein (115aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter substrate-binding protein, branched-chain amino acid transport system; K01999 branched-chain amino acid transport system substrate-binding protein id=14626690 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
twin-arginine translocation pathway signal protein
Displaying 12 items

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