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13_1_40cm_2_scaffold_2811

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2811_1
Photobacterium damselae, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..244)
DNA (243bp) protein (81aa)
Drug resistance transporter Bcr/CflA family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z2U7_LISDA
Drug resistance transporter Bcr/CflA family {ECO:0000313|EMBL:EEZ39728.1}; TaxID=675817 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Pho
hypothetical protein
13_1_40cm_2_scaffold_2811_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(211..1035)
DNA (825bp) protein (275aa)
amidohydrolase 2; K07046 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
amidohydrolase 2 id=2319316 bin=GWA2_Methylomirabilis_73_35 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
13_1_40cm_2_scaffold_2811_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1078..2982)
DNA (1905bp) protein (635aa)
Asparagine synthetase id=4814774 bin=GWC2_Methylomirabilis_70_16 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
asparagine synthase Tax=GWA2_Rokubacteria_70_23_curated
asparagine synthase
13_1_40cm_2_scaffold_2811_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3044..4687
DNA (1644bp) protein (548aa)
Glycosyl transferase, family 39 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQC0_9FIRM
arnT; undecaprenyl phosphate--lipid A 4-amino-4-deoxy-L-arabinose transferase Tax=GWA2_Rokubacteria_73_35_curated
undecaprenyl phosphate-alpha-L-Ara4N transferase
13_1_40cm_2_scaffold_2811_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4684..5487
DNA (804bp) protein (268aa)
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyltransferase id=2319272 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
family 2 glycosyl transferase
13_1_40cm_2_scaffold_2811_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5499..6059
DNA (561bp) protein (187aa)
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Molybdenum cofactor cytidylyltransferase id=5010009 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MobA-like protein
13_1_40cm_2_scaffold_2811_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6066..6959
DNA (894bp) protein (298aa)
ATPase AAA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ATPase associated with various cellular activities AAA_5 id=5010010 bin=GWA2_Methylomirabilis_73_35 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ATPase AAA
13_1_40cm_2_scaffold_2811_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6989..8101
DNA (1113bp) protein (371aa)
VWA domain containing CoxE-like protein; K07161 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
VWA domain containing CoxE-like protein id=5010011 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
VWA containing CoxE family protein
13_1_40cm_2_scaffold_2811_9
unknown

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8274..8555
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_2_scaffold_2811_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8609..9658
DNA (1050bp) protein (350aa)
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=5010012 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_2811_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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9655..10695
DNA (1041bp) protein (347aa)
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Molybdopterin binding domain-containing protein id=5010013 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein
13_1_40cm_2_scaffold_2811_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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10814..11206
DNA (393bp) protein (131aa)
SUF system FeS assembly protein id=5010014 bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=GWA2_Rokubacteria_73_35_curated
NifU family SUF system FeS assembly protein
13_1_40cm_2_scaffold_2811_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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11203..12420
DNA (1218bp) protein (406aa)
SufS subfamily cysteine desulfurase (EC:4.4.1.16); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
SufS subfamily cysteine desulfurase (EC:4.4.1.16)
Cysteine desulfurase id=5010015 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2811_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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12421..12675
DNA (255bp) protein (85aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
agmatinase; K01480 agmatinase [EC:3.5.3.11] id=14627707 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
speB; arginase
Displaying 14 items

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