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13_1_40cm_2_scaffold_3336

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3336_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1..1395)
DNA (1395bp) protein (465aa)
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-) id=14628006 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ftsH; cell division protein FtsH; ATP-dependent zinc-metallo protease (EC:3.4.24.-)
13_1_40cm_2_scaffold_3336_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1447..2013)
DNA (567bp) protein (189aa)
putative bifunctional protein tilS/hprT; K15780 bifunctional protein TilS/HprT [EC:6.3.4.19 2.4.2.8] Tax=GWA2_Rokubacteria_73_35_curated
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Putative bifunctional protein tilS/hprT id=2285131 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_3336_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(1997..2725)
DNA (729bp) protein (243aa)
Sporulation and cell division repeat protein id=2285129 bin=GWA2_Methylomirabilis_73_35 species=Xanthomonas fragariae genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_3336_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3088..3921)
DNA (834bp) protein (278aa)
cobalamin biosynthesis protein CobD Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Cobalamin biosynthesis protein CobD id=2285125 bin=GWA2_Methylomirabilis_73_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cbiB; cobalamin biosynthesis protein CbiB
13_1_40cm_2_scaffold_3336_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4008..5522)
DNA (1515bp) protein (505aa)
cbiP; adenosylcobyric acid synthase (glutamine-hydrolyzing) (EC:6.3.5.10); K02232 adenosylcobyric acid synthase [EC:6.3.5.10] Tax=GWA2_Rokubacteria_73_35_curated
cbiP; adenosylcobyric acid synthase (EC:6.3.5.10)
Cobyric acid synthase id=2285123 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_3336_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5519..6037)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XV92_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37147.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_2_scaffold_3336_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6094..7041)
DNA (948bp) protein (316aa)
TonB family protein id=2285121 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
TonB family protein; K03832 periplasmic protein TonB Tax=GWA2_Rokubacteria_73_35_curated
TonB family protein
13_1_40cm_2_scaffold_3336_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7038..7694)
DNA (657bp) protein (219aa)
Uncharacterized conserved protein id=2285119 bin=GWA2_Methylomirabilis_73_35 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_3336_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7704..9653)
DNA (1950bp) protein (650aa)
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel id=2810438 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
btuB; TonB-dependent outer membrane receptor for cobalamin and Fe transport; K02014 iron complex outermembrane recepter protein Tax=GWA2_Rokubacteria_70_23_curated
btuB; cobalamin uptake ligand-gated TonB-dependent outer membrane channel
13_1_40cm_2_scaffold_3336_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(9834..10670)
DNA (837bp) protein (279aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=14627282 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-); K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] Tax=CSP1_6_Rokubacteria
iron ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_3336_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(10667..11539)
DNA (873bp) protein (291aa)
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein id=14627281 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein Tax=CSP1_6_Rokubacteria
btuC; vitamin B12 import system permease protein BtuC
Displaying 11 items

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