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13_1_40cm_2_scaffold_3613

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3613_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..344)
DNA (342bp) protein (114aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular ligand-binding receptor
13_1_40cm_2_scaffold_3613_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(375..1088)
DNA (714bp) protein (238aa)
ABC transporter related id=3033661 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter-like protein Tax=GWC2_Rokubacteria_70_16_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_3613_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1085..1834)
DNA (750bp) protein (250aa)
ABC transporter permease; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease protein id=3033655 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
13_1_40cm_2_scaffold_3613_4
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1804..2613)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2FCE5_BURVI
Uncharacterized protein {ECO:0000313|EMBL:ERJ34411.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia comple
hypothetical protein
13_1_40cm_2_scaffold_3613_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2598..3848)
DNA (1251bp) protein (417aa)
Extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Extracellular ligand-binding receptor id=4827657 bin=GWA2_Methylomirabilis_73_35 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_3613_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3845..4777)
DNA (933bp) protein (311aa)
ABC-type transporter, integral membrane subunit id=4547723 bin=GWF2_Methylomirabilis_70_14 species=Desulfitobacterium dichloroeliminans genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
amino acid ABC transporter Tax=GWA2_Rokubacteria_70_23_curated
amino acid ABC transporter
13_1_40cm_2_scaffold_3613_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4774..5634)
DNA (861bp) protein (287aa)
Amino acid/amide ABC transporter membrane protein 1, HAAT family id=2654094 bin=GWC2_Methylomirabilis_70_24 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=GWA2_Rokubacteria_70_23_curated
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_2_scaffold_3613_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5654..6658)
DNA (1005bp) protein (335aa)
aminocarboxymuconate-semialdehyde decarboxylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative TIM-barrel fold metal-dependent hydrolase id=3830378 bin=GWA2_Methylomirabilis_73_35 species=Pseudomonas sp. GM67 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
aminocarboxymuconate-semialdehyde decarboxylase
13_1_40cm_2_scaffold_3613_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6715..7587
DNA (873bp) protein (291aa)
Uncharacterized conserved protein id=3830375 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_3613_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7634..8263
DNA (630bp) protein (210aa)
putative acetate--CoA ligase (NDP forming) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Possible acetyl-CoA synthetase id=3859498 bin=GWA2_Methylomirabilis_73_35 species=Saccharopolyspora erythraea genus=Saccharopolyspora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GCN5-related N-acetyltransferase
13_1_40cm_2_scaffold_3613_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8215..9018)
DNA (804bp) protein (268aa)
D-isomer specific 2-hydroxyacid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding id=3830373 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
D-isomer specific 2-hydroxyacid dehydrogenase
Displaying 11 items

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