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13_1_40cm_2_scaffold_39222

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_39222_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..168
DNA (168bp) protein (56aa)
guanylate cyclase Tax=CSP1_6_Rokubacteria
guanylate cyclase id=14627487 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_39222_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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168..1106
DNA (939bp) protein (313aa)
id=14627488 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10 rbh
Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_39222_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1165..3039
DNA (1875bp) protein (625aa)
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] id=14625912 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
proton-translocating NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
13_1_40cm_2_scaffold_39222_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3068..4549
DNA (1482bp) protein (494aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Proton-translocating NADH-quinone oxidoreductase, chain M id=3704552 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_39222_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4852..5946
DNA (1095bp) protein (365aa)
nuoN-1; NADH dehydrogenase I subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADH-quinone oxidoreductase subunit N id=3704556 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADH-quinone oxidoreductase subunit N
13_1_40cm_2_scaffold_39222_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6030..6743
DNA (714bp) protein (238aa)
had-superfamily hydrolase, subfamily iia; K02566 NagD protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
HAD-superfamily hydrolase, subfamily IIA id=4644046 bin=GWF2_Methylomirabilis_70_14 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
13_1_40cm_2_scaffold_39222_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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6740..8362
DNA (1623bp) protein (541aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
FAD dependent oxidoreductase id=4903986 bin=GWC2_Methylomirabilis_70_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
FAD dependent oxidoreductase
13_1_40cm_2_scaffold_39222_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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8435..9733
DNA (1299bp) protein (433aa)
Extracellular solute-binding protein, family 1 n=1 Tax=alpha proteobacterium BAL199 RepID=A8U109_9PROT rbh
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:EDP61946.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
extracellular solute-binding protein
13_1_40cm_2_scaffold_39222_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9742..10623
DNA (882bp) protein (294aa)
Binding-protein-dependent transport system inner membrane protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K1Y4_9PROT
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:EWY40976.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" sourc
ugpA; sn-glycerol-3-phosphate transport system permease protein
13_1_40cm_2_scaffold_39222_10
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10623..11471
DNA (849bp) protein (283aa)
twin-arginine translocation pathway signal protein; K05815 sn-glycerol 3-phosphate transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
Twin-arginine translocation pathway signal id=1270318 bin=GWE1_Burkholderiales_65_30 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
twin-arginine translocation pathway signal protein
13_1_40cm_2_scaffold_39222_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11468..12220
DNA (753bp) protein (251aa)
glycerophosphodiester phosphodiesterase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycerophosphodiester phosphodiesterase family protein id=4980422 bin=GWA2_Methylomirabilis_73_35 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerophosphodiester phosphodiesterase
13_1_40cm_2_scaffold_39222_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12234..13295
DNA (1062bp) protein (354aa)
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase id=4980423 bin=GWA2_Methylomirabilis_73_35 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 12 items

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