ggKbase home page

13_1_40cm_2_scaffold_4380

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4380_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(1..261)
DNA (261bp) protein (87aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14627498 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
cytochrome C oxidase
13_1_40cm_2_scaffold_4380_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(278..934)
DNA (657bp) protein (219aa)
cytochrome c oxidase, subunit II Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytochrome c oxidase, subunit II id=14627499 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cytochrome c oxidase, subunit II
13_1_40cm_2_scaffold_4380_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(941..1579)
DNA (639bp) protein (213aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4083686 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_4380_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1606..2298)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
putative cytochrome c id=14627501 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_4380_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3074..3835)
DNA (762bp) protein (254aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_4380_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3839..4639)
DNA (801bp) protein (267aa)
cyhA; 18 kda cytochrome c553 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
cyhA; 18 kda cytochrome c553 id=14627776 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_4380_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4640..6421)
DNA (1782bp) protein (594aa)
Putative uncharacterized protein id=4083694 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_4380_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

6614..8521
DNA (1908bp) protein (636aa)
ftsH; cell division protein FtsH (EC:3.4.24.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ftsH; cell division protein FtsH (EC:3.4.24.-) id=14627774 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ftsH; cell division protein FtsH (EC:3.4.24.-)
13_1_40cm_2_scaffold_4380_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

8518..9654
DNA (1137bp) protein (379aa)
protease Do (EC:3.4.21.108) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
trypsin domain/PDZ domain-containing protein; K01362 [EC:3.4.21.-] id=14627773 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
degP-2; periplasmic trypsin-like serine protease lipoprotein DegP
Displaying 9 items

View Taxonomy