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13_1_40cm_2_scaffold_4508

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4508_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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93..1466
DNA (1374bp) protein (458aa)
acetoacetate metabolism regulatory protein AtoC n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036C7B55
response regulator in two-component regulatory system, sigma 54-dependent Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
response regulator in two-component regulatory system, sigma 54-dependent
13_1_40cm_2_scaffold_4508_2
unknown

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1466..2146
DNA (681bp) protein (227aa)

This feature has no annotations

13_1_40cm_2_scaffold_4508_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2344..2790
DNA (447bp) protein (149aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627436 bin=bin7_NC10_sister species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_4508_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2815..3045)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQ83_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM31302.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agr
13_1_40cm_2_scaffold_4508_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3042..3887)
DNA (846bp) protein (282aa)
putative dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=1773285 bin=GWD2_Deltaproteobacteria_55_8 species=Pyrobaculum oguniense genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
protocatechuate 3,4-dioxygenase
13_1_40cm_2_scaffold_4508_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3912..4886)
DNA (975bp) protein (325aa)
Putative dioxygenase, 2OG-Fe(II) oxygenase superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMT8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:ETX02243.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
2OG-Fe(II) oxygenase
13_1_40cm_2_scaffold_4508_7
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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5000..6364
DNA (1365bp) protein (455aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] Tax=CG_Delta_03
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Aldehyde Dehydrogenase n=2 Tax=Rhodothermus marinus RepID=D0MKH7_RHOM4 id=5225821 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_2_scaffold_4508_8
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

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6369..8003
DNA (1635bp) protein (545aa)
acetolactate synthase large subunit (EC:2.2.1.6) Tax=CG_Delta_01
acetolactate synthase large subunit (EC:2.2.1.6)
acetolactate synthase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003482B11
13_1_40cm_2_scaffold_4508_9
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8000..8371)
DNA (372bp) protein (124aa)
Response regulatory protein id=4224084 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:AIO26165.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkhold
response regulator receiver
13_1_40cm_2_scaffold_4508_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8501..9139)
DNA (639bp) protein (213aa)
Response regulator receiver n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1Q7_NITHN
response regulator receiver Tax=RBG_13_Deltaproteobacteria_47_9_curated
response regulator receiver
13_1_40cm_2_scaffold_4508_11
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9124..12246)
DNA (3123bp) protein (1041aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGT6_SYNFM
multi-sensor signal transduction histidine kinase Tax=RBG_13_Deltaproteobacteria_47_9_curated
multi-sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_4508_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(12336..12431)
DNA (96bp) protein (32aa)
OmpA/MotB domain protein Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

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