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13_1_40cm_2_scaffold_51518

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_51518_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..504
DNA (504bp) protein (168aa)
acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=GWC2_Rokubacteria_70_16_curated
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase id=4412861 bin=GWF2_Methylomirabilis_70_14 species=Phyllobacterium sp. YR531 genus=Phyllobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_51518_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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501..1637
DNA (1137bp) protein (379aa)
L-carnitine dehydratase/bile acid-inducible protein F id=4412851 bin=GWF2_Methylomirabilis_70_14 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yfdE; L-carnitine dehydratase/bile acid-inducible protein F Tax=GWA2_Rokubacteria_70_23_curated
L-carnitine dehydratase/bile acid-inducible protein F
13_1_40cm_2_scaffold_51518_3
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1658..2167
DNA (510bp) protein (170aa)
Chromate transporter n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S008_THEOJ
Chromate transporter {ECO:0000313|EMBL:KEQ27450.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
chromate transporter
13_1_40cm_2_scaffold_51518_4
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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2164..2685
DNA (522bp) protein (174aa)
Chromate transporter n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QKM1_METTR
chromate transporter; K07240 chromate transporter Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
chromate transport protein
13_1_40cm_2_scaffold_51518_5
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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comp(2682..4313)
DNA (1632bp) protein (544aa)
amino acid permease family protein Tax=RBG_16_Chloroflexi_58_14_curated
Amino acid transporter id=2876962 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_40cm_2_scaffold_51518_6
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

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4399..4818
DNA (420bp) protein (140aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABA19988.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABA19988.1};; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" so
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3MG98_ANAVT
13_1_40cm_2_scaffold_51518_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4918..5649
DNA (732bp) protein (244aa)
rluD_3; ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=GWA2_Rokubacteria_73_35_curated
RNA pseudouridylate synthase id=1890952 bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RluA family pseudouridine synthase
13_1_40cm_2_scaffold_51518_8
unknown

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5908..6129
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_51518_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6104..7306)
DNA (1203bp) protein (401aa)
DEAD/DEAH box helicase domain protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:AHG91795.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Putative uncharacterized protein id=4400730 bin=GWF2_Methylomirabilis_70_14 species=uncultured Aminicenantes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_51518_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

7648..8199
DNA (552bp) protein (184aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative uncharacterized protein id=4221618 bin=GWA2_Methylomirabilis_73_35 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_51518_11
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(8168..9586)
DNA (1419bp) protein (473aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Uncharacterized protein id=4950952 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
protein of unknown function DUF112 transmembrane
13_1_40cm_2_scaffold_51518_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9583..10095)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HPX8_9CLOT
Putative uncharacterized protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Displaying 12 items

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