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13_1_40cm_2_scaffold_661

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_661_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13..384)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00036FDE29
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA26041.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila
13_1_40cm_2_scaffold_661_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(397..1281)
DNA (885bp) protein (295aa)
ABC transporter permease protein id=4507383 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2 Tax=GWC2_Rokubacteria_70_16_curated
peptide ABC transporter permease
13_1_40cm_2_scaffold_661_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1285..2226)
DNA (942bp) protein (314aa)
ABC transporter permease protein id=4507380 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=GWC2_Rokubacteria_70_16_curated
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_661_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2223..3809)
DNA (1587bp) protein (529aa)
Extracellular solute-binding protein family 5 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UDF0_METS4
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=GWC2_Rokubacteria_70_16_curated
extracellular solute-binding protein
13_1_40cm_2_scaffold_661_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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3921..4211
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=4527437 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_661_6
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(4213..4434)
DNA (222bp) protein (74aa)
Zinc finger, CDGSH-type id=14625183 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
Zinc finger, CDGSH-type Tax=CSP1_6_Rokubacteria
Zinc finger, CDGSH-type
13_1_40cm_2_scaffold_661_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4497..5888
DNA (1392bp) protein (464aa)
Radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Radical SAM domain protein id=4817720 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
radical SAM domain protein
13_1_40cm_2_scaffold_661_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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5985..6284
DNA (300bp) protein (100aa)
nitrogen-fixing NifU domain-containing protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nitrogen fixation protein NifU id=3597763 bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrogen-fixing NifU domain-containing protein
13_1_40cm_2_scaffold_661_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6425..7516
DNA (1092bp) protein (364aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_661_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7532..8290
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363E12B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85897.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_661_11

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comp(8305..9408)
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373327D
Putative uncharacterized protein {ECO:0000313|EMBL:ADC35828.1}; TaxID=698393 species="Bacteria; environmental samples.;" source="uncultured bacterium 89.;"
hypothetical protein
13_1_40cm_2_scaffold_661_12
unknown

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comp(9422..9685)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_661_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9803..10711)
DNA (909bp) protein (303aa)
cytochrome C550 n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375A72
dppC8; peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
yddQ; Inner membrane ABC transporter permease protein YddQ
13_1_40cm_2_scaffold_661_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(10708..11721)
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component domain protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4H5_9PROT
ddpB; putative D,D-dipeptide transport system permease protein ddpB; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
D-Ala-D-Ala transporter subunit
13_1_40cm_2_scaffold_661_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11726..13291)
DNA (1566bp) protein (522aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF080 RepID=J2K8Q2_9RHIZ rbh
dppAch2; ABC transporter, substrate-binding protein (Dipeptide) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
yddS; Putative ABC transporter periplasmic-binding protein YddS
13_1_40cm_2_scaffold_661_16
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13339..14196)
DNA (858bp) protein (286aa)
GCN5-related N-acetyltransferase n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UFZ2_9CYAN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGK88020.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-
GCN5-related N-acetyltransferase
13_1_40cm_2_scaffold_661_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14262..15344
DNA (1083bp) protein (361aa)
hypothetical protein; K09703 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=3859517 bin=GWF2_Methylomirabilis_70_14 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Protein of hypothetical function DUF917
13_1_40cm_2_scaffold_661_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15341..16885
DNA (1545bp) protein (515aa)
hydantoinase A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Hydantoinase A id=4565333 bin=GWC2_Methylomirabilis_70_24 species=Azorhizobium caulinodans genus=Azorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hydantoinase A
13_1_40cm_2_scaffold_661_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(16882..17538)
DNA (657bp) protein (219aa)
hypothetical protein; K14591 protein AroM Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
AroM protein id=3859585 bin=GWF2_Methylomirabilis_70_14 species=Anaerobaculum hydrogeniformans genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
AroM family protein
13_1_40cm_2_scaffold_661_20
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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17606..19537
DNA (1932bp) protein (644aa)
dehydrogenase, E1 component; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=GWA2_Rokubacteria_70_23_curated
Dehydrogenase E1 component id=4009634 bin=GWC2_Methylomirabilis_70_24 species=Mesorhizobium metallidurans genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dehydrogenase, E1 component
13_1_40cm_2_scaffold_661_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19641..20483
DNA (843bp) protein (281aa)
iron permease FTR1; K07243 high-affinity iron transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
iron permease FTR1; K07243 high-affinity iron transporter id=14630789 bin=bin9_gal15 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
high-affinity Fe2+/Pb2+ permease
13_1_40cm_2_scaffold_661_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(20488..21885)
DNA (1398bp) protein (466aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3) Tax=GWA2_Rokubacteria_70_23_curated
Long-chain-fatty-acid--CoA ligase id=3021531 bin=GWF2_Methylomirabilis_70_14 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadD; fatty-acid-CoA ligase
13_1_40cm_2_scaffold_661_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(21891..22826)
DNA (936bp) protein (312aa)
UbiD family decarboxylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
UbiD decarboxylase family protein id=4770811 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
UbiD family decarboxylase
Displaying 23 items

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