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13_1_40cm_2_scaffold_737

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_737_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..113)
DNA (111bp) protein (37aa)
pyruvate ferredoxin oxidoreductase subunit alpha; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_40cm_2_scaffold_737_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(135..1343)
DNA (1209bp) protein (403aa)
porD-like; pyruvate synthase subunit delta (EC:1.2.7.1); K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Orf c01004 protein id=2591423 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta
13_1_40cm_2_scaffold_737_3
unknown

Not on your lists

1790..2080
DNA (291bp) protein (97aa)

This feature has no annotations

13_1_40cm_2_scaffold_737_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2047..2625)
DNA (579bp) protein (193aa)
SNO glutamine amidotransferase; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glutamine amidotransferase subunit PdxT id=2940470 bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
13_1_40cm_2_scaffold_737_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2640..3536)
DNA (897bp) protein (299aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Pyridoxal biosynthesis lyase PdxS id=2591425 bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 rbh
pyridoxal biosynthesis lyase PdxS
13_1_40cm_2_scaffold_737_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3656..5215)
DNA (1560bp) protein (520aa)
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Transcriptional regulator, GntR family with aminotransferase domain protein id=2591427 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
GntR family transcriptional regulator
13_1_40cm_2_scaffold_737_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5343..5456
DNA (114bp) protein (38aa)
id=2591429 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=2591429 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_737_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5457..5642
DNA (186bp) protein (62aa)
id=3741115 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=2591430 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_737_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

5728..5907
DNA (180bp) protein (60aa)
Putative uncharacterized protein id=4306265 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_737_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5912..6658)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002FD98F0
Uncharacterized protein {ECO:0000313|EMBL:ETX04304.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
MerR family transcriptional regulator
13_1_40cm_2_scaffold_737_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6642..6953)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XVX3_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP34758.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_2_scaffold_737_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7048..7428)
DNA (381bp) protein (127aa)
hypothetical protein id=4306254 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_737_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7448..8863)
DNA (1416bp) protein (472aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWA2_Rokubacteria_73_35_curated
amidase (EC:3.5.1.4)
Amidase id=4306251 bin=GWA2_Methylomirabilis_73_35 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_737_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8863..9018)
DNA (156bp) protein (52aa)
hypothetical protein id=4306247 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_737_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9047..10942
DNA (1896bp) protein (632aa)
ferredoxin Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ferredoxin id=14627556 bin=bin7_NC10_sister species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ferredoxin
13_1_40cm_2_scaffold_737_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10939..11793
DNA (855bp) protein (285aa)
MaoC-like dehydratase id=4306188 bin=GWA2_Methylomirabilis_73_35 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl dehydratase Tax=GWA2_Rokubacteria_73_35_curated
dehydratase
13_1_40cm_2_scaffold_737_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

11790..12812
DNA (1023bp) protein (341aa)
uroporphyrinogen decarboxylase (URO-D); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uroporphyrinogen decarboxylase id=4306186 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
uroporphyrinogen decarboxylase
13_1_40cm_2_scaffold_737_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(12818..13897)
DNA (1080bp) protein (360aa)
GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
GTP-binding protein YchF id=4306184 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GTP-dependent nucleic acid-binding protein EngD
13_1_40cm_2_scaffold_737_19
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

13937..14833
DNA (897bp) protein (299aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627552 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_737_20
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

14872..15237
DNA (366bp) protein (122aa)
7-cyano-7-deazaguanine reductase; K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
NADPH-dependent 7-cyano-7-deazaguanine reductase id=4306181 bin=GWA2_Methylomirabilis_73_35 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
7-cyano-7-deazaguanine reductase
13_1_40cm_2_scaffold_737_21
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(15242..15403)
DNA (162bp) protein (54aa)
Uncharacterized protein id=4306179 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Magnetococcus taxon_order=Magnetococcales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_737_22
unknown

Not on your lists

15624..16190
DNA (567bp) protein (189aa)

This feature has no annotations

13_1_40cm_2_scaffold_737_23
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

comp(16088..17047)
DNA (960bp) protein (320aa)
Glycosyl transferase family 2 n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9VZT3_9CYAN
family 2 glycosyl transferase
glycosyl transferase family protein Tax=GWA2_WOR_2_45_18_curated
13_1_40cm_2_scaffold_737_24
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17044..17433)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000344A7BF
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase {ECO:0000313|EMBL:ABQ26529.1}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geoba
Displaying 24 items

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