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13_1_40cm_2_scaffold_9475

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_9475_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1..639
DNA (639bp) protein (213aa)
Spermidine synthase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Spermidine synthase id=4472637 bin=GWA2_Methylomirabilis_73_35 species=Gallaecimonas xiamenensis genus=Gallaecimonas taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_9475_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(617..2296)
DNA (1680bp) protein (560aa)
ABC transporter Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter related protein id=4472628 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_2_scaffold_9475_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2297..2743)
DNA (447bp) protein (149aa)
CoA-binding domain protein id=4472625 bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
CoA-binding domain-containing protein; K06929 Tax=GWA2_Rokubacteria_73_35_curated
CoA-binding domain-containing protein
13_1_40cm_2_scaffold_9475_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2757..3848)
DNA (1092bp) protein (364aa)
3'-5' exonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3'-5' exonuclease id=4472621 bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3'-5' exonuclease
13_1_40cm_2_scaffold_9475_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3893..4675)
DNA (783bp) protein (261aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=4472514 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain type dehydrogenase/reductase
13_1_40cm_2_scaffold_9475_6
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4721..5104)
DNA (384bp) protein (128aa)
Sensory box histidine kinase/response regulator n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CPS3_MYXFH
sensory box histidine kinase/response regulator
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:AEI62946.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoc
13_1_40cm_2_scaffold_9475_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5146..6150)
DNA (1005bp) protein (335aa)
Nucleotidyl transferase id=14626807 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Nucleotidyl transferase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Nucleotidyl transferase
13_1_40cm_2_scaffold_9475_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6703..7611
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
2-hydroxy-3-oxopropionate reductase id=4472507 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_9475_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7608..8102
DNA (495bp) protein (165aa)
conserved protein of unknown function; putative thioesterase domain Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Uncharacterized protein id=4761802 bin=GWA2_Elusimicrobia_69_24 species=Thalassospira profundimaris genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
conserved protein of unknown function; putative thioesterase domain
13_1_40cm_2_scaffold_9475_10
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8141..8461
DNA (321bp) protein (107aa)
Putative RNA methylase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HLA2_CYAP4
RNA methylase
Uncharacterized protein {ECO:0000313|EMBL:KJH69376.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
Displaying 10 items

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