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13_1_40cm_2_scaffold_43344_2

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(2291..2575)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 112.0
  • Bit_score: 148
  • Evalue 5.00e-33
RNP-1 like RNA-binding protein id=4969022 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 113.0
  • Bit_score: 145
  • Evalue 2.30e-32
RNA-binding proteins (RRM domain) similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 111.0
  • Bit_score: 81
  • Evalue 2.00e-13

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCCCGCAAAGTTGTTCGTCGGTAATCTCTCATTCCAGGCCACGGAAGAAGATCTGCGCGAGTTGTTCGCTCAGGCCGGAAACGTGGAAACAGTGCGCATCATCAAGGAAGAGGCATCAAAGGCTATCGAGGTACTCAATGGTCGGCTCTTCCGCGATCGGAACCTGGTCGTCGACGAGGCCCGTCCCCAGCCACAGCGCAGCCCCGGCGGCGGAGGGGGCGACCGTGGTGGACGCGGCCCGCGTCCGGGCGGGGGCTCTGGCGGCGGAAGCTGGCGGCGCTGA
PROTEIN sequence
Length: 95
MPAKLFVGNLSFQATEEDLRELFAQAGNVETVRIIKEEASKAIEVLNGRLFRDRNLVVDEARPQPQRSPGGGGGDRGGRGPRPGGGSGGGSWRR*