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13_1_40cm_2_scaffold_43344

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_43344_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..2235
DNA (2235bp) protein (745aa)
DNA polymerase II Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase id=4969020 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA polymerase II
13_1_40cm_2_scaffold_43344_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2291..2575)
DNA (285bp) protein (95aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=4969022 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA-binding proteins (RRM domain)
13_1_40cm_2_scaffold_43344_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2693..3487)
DNA (795bp) protein (265aa)
hypothetical protein; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short-chain dehydrogenase/reductase SDR id=4969023 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_43344_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3487..4050)
DNA (564bp) protein (188aa)
Uncharacterized protein id=4969024 bin=GWA2_Methylomirabilis_73_35 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein; K09763 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_43344_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4047..4568)
DNA (522bp) protein (174aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RDD domain containing protein id=4969025 bin=GWA2_Methylomirabilis_73_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
13_1_40cm_2_scaffold_43344_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4590..5792
DNA (1203bp) protein (401aa)
molybdopterin-guanine dinucleotide biosynthesis protein B; K03750 molybdopterin molybdotransferase [EC:2.10.1.1] Tax=GWC2_Rokubacteria_70_16_curated
Molybdenum cofactor synthesis domain protein id=3926923 bin=GWC2_Methylomirabilis_70_16 species=Thioalkalivibrio thiocyanoxidans genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molybdopterin-guanine dinucleotide biosynthesis protein B
13_1_40cm_2_scaffold_43344_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5785..7359
DNA (1575bp) protein (525aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=14627421 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_43344_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7361..7630
DNA (270bp) protein (90aa)
UPF0176 protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
UPF0176 protein id=3926920 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_43344_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7788..8078
DNA (291bp) protein (97aa)
Uncharacterized protein id=4638361 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
Displaying 9 items

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