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13_1_40cm_2_scaffold_2352

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2352_1
RBG_16_Archaea_50_20_curated, Archaea

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286..525
DNA (240bp) protein (80aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_2352_2
RBG_16_Archaea_50_20_curated, Archaea

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617..928
DNA (312bp) protein (104aa)
PilT domain-containing protein Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_2352_3
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(1070..1726)
DNA (657bp) protein (219aa)
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_16_Bathyarchaeota_48_13_curated
Ribonuclease HII n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LKR9_THEBM
ribonuclease HII
13_1_40cm_2_scaffold_2352_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1723..2709)
DNA (987bp) protein (329aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XYL9_9EURY
rrmJ; ribosomal RNA large subunit methyltransferase J RrmJ
13_1_40cm_2_scaffold_2352_5
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

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comp(2872..3213)
DNA (342bp) protein (114aa)
Methionine--tRNA ligase n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5Y7_THEAS
methionyl-tRNA synthetase; K06878 tRNA-binding protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
methionyl-tRNA synthetase
13_1_40cm_2_scaffold_2352_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(3255..4529)
DNA (1275bp) protein (425aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Peptidase M16 family protein id=1751304 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
peptidase M16 family protein
13_1_40cm_2_scaffold_2352_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4519..5841)
DNA (1323bp) protein (441aa)
peptidase M16 domain-containing protein; K07263 zinc protease [EC:3.4.24.-] Tax=RBG_16_Euryarchaeota_67_27_curated
Peptidase M16 domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVK0_ROSS1
peptidase M16 domain-containing protein
13_1_40cm_2_scaffold_2352_8
RBG_16_Archaea_50_20_curated, Archaea

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comp(5861..6463)
DNA (603bp) protein (201aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10) Tax=RBG_16_Archaea_50_20_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV0_9CREN
13_1_40cm_2_scaffold_2352_9
uncultured marine crenarchaeote E48-1C, Crenarchaeota, Archaea

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6583..7794
DNA (1212bp) protein (404aa)
DUF2088 domain protein n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU8_9CREN
DUF2088 domain protein {ECO:0000313|EMBL:ADP09473.1}; TaxID=907718 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured marine crenarchaeote
hypothetical protein
13_1_40cm_2_scaffold_2352_10
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

7841..9847
DNA (2007bp) protein (669aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_2352_11
RBG_16_Archaea_50_20_curated, Archaea

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comp(9882..10646)
DNA (765bp) protein (255aa)
Coenzyme F420-0 gamma-glutamyl ligase n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FR57_METHJ
F420-dependent oxidoreductase Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_2352_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(10654..11325)
DNA (672bp) protein (224aa)
histidine ammonia-lyase; K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RBG_16_Archaea_50_20_curated
Histidine ammonia-lyase n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7VA56_THELD
histidine ammonia-lyase
13_1_40cm_2_scaffold_2352_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11325..12128)
DNA (804bp) protein (268aa)
histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase {ECO:0000255|HAMAP-Rule:MF_00229}; Short=Histidase {ECO:0000255|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000255|HAMAP-Rule:MF_00229};; TaxID=293826 species="Bacteria; Firmicutes
Histidine ammonia-lyase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=HUTH_ALKMQ
13_1_40cm_2_scaffold_2352_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(12180..13754)
DNA (1575bp) protein (525aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_16_Archaea_50_20_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=HUTU_SYMTH
13_1_40cm_2_scaffold_2352_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(13868..15073)
DNA (1206bp) protein (402aa)
hutI; imidazolonepropionase HutI (EC:3.5.2.7) Tax=RBG_16_Archaea_50_20_curated
hutI; imidazolonepropionase HutI (EC:3.5.2.7)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003721FA4
13_1_40cm_2_scaffold_2352_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(15160..16251)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HNS5_THES4
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_2_scaffold_2352_17
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(16452..17549)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Bacillus sp. 95MFCvi2.1 RepID=UPI00037B5A3D
SagB-type dehydrogenase domain protein
SagB-type dehydrogenase domain-containing protein {ECO:0000313|EMBL:EOP59350.1}; TaxID=1053234 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" sourc
13_1_40cm_2_scaffold_2352_18

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comp(17890..18345)
DNA (456bp) protein (152aa)
Protein containing DUF61 {ECO:0000313|EMBL:AGF93551.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Displaying 18 items

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